Tessaracoccus flavus: RPIT_02920
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Entry
RPIT_02920 CDS
T04688
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPIT_02920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfl03021
]
RPIT_02920
03400 DNA repair and recombination proteins [BR:
tfl03400
]
RPIT_02920
Enzymes [BR:
tfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPIT_02920
Transcription machinery [BR:
tfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPIT_02920
DNA repair and recombination proteins [BR:
tfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPIT_02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
AQP43894
UniProt:
A0A1Q2CCR3
LinkDB
All DBs
Position
655148..659086
Genome browser
AA seq
1312 aa
AA seq
DB search
MLDVNFYDELRIGLASADQIREWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAHMITAVDEEARHRDLSSLQAKVEVETKQVAQRRDAEIEARMQKLEED
LAQLEEEGAKADIKRKVREAAEREANQIRTRSQRQLDRIDEVWQRFKTLKVQDLEGDETL
YREMKKRFGKYFEGSMGAEAIQKRLESFDLKAETESLRETIATGKGQRKTRALKRLKVVN
AFLTGRNHPSAMVLGAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLDDLNHAQNIKAAKRMVERQR
PVVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSTNNILKPADGRPVTMPTQDMIIGHYFLTSVRPGKGEGRM
FSSLAEAIMAFDRGDLSIGSNIKIRLNDVIVEGVEPRADGSVLVETTLGRALFNEALPSD
FGYVNAVVGKKVLGQIVNDLAERYPKIEVATTLDNLKDMGFQWASRSGVTVSISDVQTPP
NKAEVLEGYERRASKIDQQYDRGNVTEDERRQELIDLWGEATAELTEAMQKNFTSDNPIF
MMVDSGARGNMTQMRQIAAMRGLVANPKGEIIARPIKSNFREGLSVLEYFISTHGGRKGQ
ADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLTKVIAKWTTDGKDEEGRDIRVPA
EPFAKNASVETPVDVETAVYARTLAVDVADDKGTVLVAAGTDLGDAEISKLVAAGVTEVK
VRSVLTCESTVGTCAMCYGRSLASGKTVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGGVA
GDDITQGLPRVTELFEARQPKGKAPIAEADGVVRIEDGDRSRKIVIVRDDGGEDLEYPVA
RRTRLEFDDHEGRRIAIRDGVHVSIGQQLTAGQVDPQDVLRVRGLRKVQEHLVDEVQLVY
RTQGAPIHDKHIEIIIRQMLRRVTVIDSGDTMMMPGELVDRGSYEAANRQALSEGGKPAE
GRPVLMGITKASLATESWLSAASFQETTKVLTDAAIQGKTDTLQGLKENVILGKLIPAGT
GLERYRNIRVEPTEEARASAFTMSYDPYDYSFGSDVVGPAVPLDEMDFGEIR
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtgaacttctacgacgaactgcggatcggtctcgcgagcgccgatcagatc
cgcgagtggtcgcacggcgaggtcaagaagccggagaccatcaactaccgaaccctcaag
cccgagcgtgacggcctcttctgcgagaagatcttcggcccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcagcaacgtgcgccgcgagcgcatgggccacatcgagctggctgcgccc
gtgacccacatctggtacttcaagggcgtgccgagccggctgggctacctgctggacatc
gcgccgaaggacctggagaaggtcatctatttcgccgcgcacatgatcaccgcggtcgac
gaggaggctcgccaccgcgacctcagcagcctgcaggcgaaggtcgaagtggagaccaag
caggtcgcccagcgacgcgacgccgagatcgaagcgcgcatgcagaagctcgaggaggac
ctcgcgcagctggaggaagagggcgcgaaggccgacatcaagcgcaaggtccgcgaagcg
gccgagcgtgaggccaaccagatccggacccgctcgcagcgtcagctggaccgcatcgac
gaggtgtggcagcgcttcaagaccctcaaggtccaggacctcgaaggcgacgagacgctc
taccgcgagatgaagaagcgcttcggcaagtacttcgagggctcgatgggcgccgaggcg
atccagaagcgcctcgagtcgttcgacctcaaggccgagaccgagtcgctgcgcgagacc
atcgccaccggcaagggccagcgcaagacccgcgccctcaagcgtctcaaggtcgtcaac
gcgttcctcaccgggcgcaaccacccgtcggcgatggtgctgggcgctgtcccggtcatc
ccgccggacctgcgtccgatggtccagctggacggcggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgctcgacctc
ggcgctcccgagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtggattcg
ctgttcgacaacggccgccgcgggcgcccggtcacagggcccggcaaccggccgctgaag
tcgatctcggacatgctgaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggtccccagctcaagcttcaccag
tgcggtctgccgaaggcgatggctctggaactcttcaagccgttcgtgatgaagcgcctg
gacgacctcaaccacgctcagaacatcaaggcagccaagcgcatggtcgagcgccagcgt
ccagtggtgtgggatgtcctcgaagaggtcatcgccgagcaccccgtgctgctcaaccgt
gctccgacgctgcaccgcctcggcatccaggcgttcgagccgcagctcatcgagggcaag
gccatccagatccacccgctcgtgtgcacggcgttcaacgccgacttcgacggcgaccag
atggctgtccacctcccgctgtcggcggaggcccaggccgaagcgcgcgtgctgatgttg
tccaccaacaacatcctcaagcccgccgacggacgcccggtcaccatgcccacgcaggac
atgatcatcggtcactacttcctcacctcggttcgccccgggaagggggagggccggatg
ttctcctcgctcgccgaggcgatcatggcgttcgaccgcggagacctctccatcggctcg
aacatcaagatccgcctgaacgacgtcatcgtcgagggcgtcgagccgcgcgccgatggc
tcggtgctcgtcgagaccacgctgggccgcgccctcttcaacgaggcactgccttccgac
ttcggctacgtcaatgccgtggtcgggaagaaggtgctcgggcagatcgtcaacgatctg
gcggagcgttacccgaagatcgaggtggccaccacccttgacaacctcaaggacatgggc
ttccagtgggcgtcgcgctccggcgtgaccgtctcgatctccgacgtccagaccccgccc
aacaaggctgaggtgctggagggttacgagcgtcgcgcgtccaagatcgaccagcagtac
gaccgtggcaacgtgaccgaggacgagcgccgtcaggagctcatcgacctctggggcgag
gcgacggccgaactcaccgaggcgatgcagaagaacttcacgagcgacaacccgatcttc
atgatggtggactcgggcgcccgaggaaacatgacccagatgcgccagatcgccgccatg
cgtggcctggtggccaacccgaagggtgagatcatcgcgcgtccgatcaagtcgaacttc
cgcgagggtctgtccgtcctcgagtacttcatctcgacgcacggcggccgtaagggacag
gccgacaccgccctgcggaccgccgactccggctacctcacccgtcgtctcgtggacgtc
tcccaggacgtcatcatccgcgaagaggactgtggcaccgagcgtggcctcaccaaggtc
atcgcgaagtggaccaccgacggcaaggacgaggagggccgtgacatccgcgtgcccgca
gagccgttcgccaagaacgcctcggtggagactcccgtcgacgtcgagacggccgtgtac
gcacggaccctcgcggtggacgtcgcggacgacaagggcactgtcctggtggctgcgggc
accgatctcggcgatgccgaaatcagcaagctcgtcgccgccggcgttacggaggtgaag
gtccgctcggtcctcacctgtgagtccaccgtcggcacctgcgccatgtgctacgggcgt
tcgctggcctcgggtaagaccgtcgacgtgggtgaggccgtcggtatcgtcgctgcccag
tcgatcggtgagcccggcacccagctgacgatgcgtaccttccacaccggtggtgtggcg
ggcgacgacatcactcagggtctgcctcgtgtcaccgagctcttcgaggctcgtcagccg
aagggcaaggcgcccatcgctgaggccgacggcgtcgtgcgcatcgaggacggggaccgt
tcccgcaagatcgtcatcgtccgcgatgacggcggtgaagacctcgagtaccccgtggcc
cgtcgtacccgtctggagttcgacgaccacgagggccgccgtatcgcgatcagggacggc
gtgcacgtcagcatcgggcagcagctgaccgctggtcaggtggacccgcaggatgtcctg
cgcgtccgtggcctccgcaaggtgcaggagcacctggtggatgaggttcagctggtgtac
cggacgcagggtgcgccgattcacgacaagcacatcgagatcatcatccgccagatgctg
cgccgcgtgacggtcatcgactcgggcgacacgatgatgatgcccggtgagctcgtcgac
cgtggatcctacgaggcggccaaccgtcaggcgctctccgagggcggcaagcccgctgag
ggtcgcccggtgctcatgggcatcaccaaggcgtcgctcgcgacggagtcgtggctgtcg
gcggcctccttccaggagaccaccaaggtgctcaccgacgcggcgatccagggcaagacg
gacacgctgcagggcctcaaggagaacgtcatcctcggcaagctgatcccggccggcacc
ggcctggagcggtaccgcaacatccgtgtggagccgacggaggaagcccgcgcttctgcg
ttcacgatgagctacgacccgtacgactactcgttcggttccgatgtggtcggccccgcc
gtcccgctcgacgaaatggacttcggcgagatccgctga
DBGET
integrated database retrieval system
