Tessaracoccus flavus: RPIT_03765
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Entry
RPIT_03765 CDS
T04688
Name
(GenBank) endonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03030
DNA replication
tfl03430
Mismatch repair
tfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPIT_03765
03430 Mismatch repair
RPIT_03765
03440 Homologous recombination
RPIT_03765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfl03032
]
RPIT_03765
03400 DNA repair and recombination proteins [BR:
tfl03400
]
RPIT_03765
Enzymes [BR:
tfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPIT_03765
DNA replication proteins [BR:
tfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPIT_03765
DNA repair and recombination proteins [BR:
tfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPIT_03765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DUF1816
Motif
Other DBs
NCBI-ProteinID:
AQP44040
UniProt:
A0A1Q2CD85
LinkDB
All DBs
Position
complement(835603..837411)
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AA seq
602 aa
AA seq
DB search
MSSVNLQPSFDDLGVPLADVTFVVVDLETTGGSAEAEITEVGAVKVRGGEVQGEFQSLVR
PTTPIPPMIQVLTGITNHMVAAAPPASQVLPAFAEFAAGSVIVAHNARFDTGFLRRGYEQ
LGLAWPRPTVIDTVAVARTALLRDEVPNCKLATLARYFRSSTEPNHRALSDARATVDVLH
GLMERVGNLGVHTLEDLAEFSLQVSPDRRAKRVWASDAPEQAGVYYFVTDSVDASGAPKR
EVLYVGKSNNLRRRVRSYFSAAEKRGRIHEMVRVATGVEFVACATELEAEVRELRMIESL
APRYNRRSKQQRRLLWLKLTKEAFPRLSIVTQVRDGDHYFGPFRSRESAEEAALTLYDAF
QLRRCTARLSARRASAPCALAEMGRCLAPCELGPSAEAYAGVVGAVTRSWEVDVRPVLRS
VRGRLTKLISQQRFEEAGAISGRLSAYHRTSLRYHRIRSLARCPQIVAAVPSAEGWDIHV
IRYGRLAAATTAPSARARAAAEEAVAAAETVLAPVSGLPAGSVEEAERIASWLELPGVRL
IDVDGEWAWPVGAGVAADALPEELLGSDLMASTPRCDDESWLQTADVRRLPGGEGALRAA
VS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgtcaacctgcaaccgtccttcgacgatctcggcgtcccgctggccgacgtc
acgttcgtcgtcgtggacctcgagaccaccggcggctccgccgaggcggagatcacggag
gtgggcgcggtcaaggttcgtggcggcgaggtgcagggagagttccagagcctggtccgg
cccaccaccccgatccccccgatgatccaggtcctgacggggatcaccaaccacatggtc
gcggcagccccgcctgcctcgcaggtgctgcccgccttcgctgagttcgcagcggggtcg
gtgatcgttgcccacaacgcccgcttcgacaccggcttcctccgtcgcggttacgaacag
ttgggtctggcctggccgcgccccaccgtcatcgacacggtcgcggtggcccgcaccgcc
ctgctgagggacgaggtgcccaactgcaagttggccacgctcgcccgctatttccggtcg
agcaccgagccgaaccaccgcgcgctgagcgacgcgcgcgccaccgtcgacgtcctccac
gggctgatggagcgcgtcggcaacctgggcgtccacacgctcgaggacctcgccgagttc
tccctgcaggtatcgccggacaggcgcgcgaagcgggtgtgggcgagcgacgcaccggag
caggcgggtgtctactacttcgtcaccgactccgtggatgcgagcggcgccccgaagcgc
gaggtgctgtatgtcggcaagtcgaacaacctccgacggcgggtgcgctcctacttctcc
gccgcggagaagcgcggccgcatccatgagatggtgcgggtggcgacgggggtcgagttc
gtggcgtgcgccaccgagctggaggcggaggtccgggagctgcggatgatcgagtcgctc
gctccgcgctacaaccgacgctccaagcagcagcggaggctgctctggttgaagctgacc
aaagaggccttcccgaggctttcaatcgtgacgcaggtgcgcgacggcgaccactatttc
gggccgttccgcagcagggaatctgccgaggaggctgcgttgacgctctacgacgcgttc
caactgcgccggtgcaccgcccgactctccgcccgccgcgcctccgcaccgtgcgccctt
gccgagatgggccggtgcctggccccctgcgagctggggccgtcagccgaggcctacgcc
ggggtcgtcggggccgtcacgcggagctgggaggtcgacgtccgcccggtcctgcgcagc
gtccggggccggctgaccaagctgatctcccaacagcgtttcgaggaggccggcgccatc
tctgggcggctgtccgcctaccaccgcacgtcgctccgctaccaccgcatccgctcactc
gcccggtgcccccagattgtggcggcggtcccatccgctgagggatgggacatccacgtg
atccgctacggcaggctcgccgcagccacgaccgctccctcggcccgcgcccgagccgcg
gccgaagaggcggtggcggccgccgagacagtgttggcaccagtgtcggggctgccggcg
ggcagtgtcgaggaggcggagcggatcgcgtcctggctggagcttccgggtgtgcggctc
attgacgtcgacggcgaatgggcgtggccggtcggggcgggggttgccgccgacgcattg
ccggaggagttgctgggctccgacctgatggcctcgacgccccggtgcgacgacgagtcg
tggcttcagacggcagacgtaaggcgcctccccggcggggaaggcgccttacgagcagcg
gtcagctga
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