Tessaracoccus flavus: RPIT_04100
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Entry
RPIT_04100 CDS
T04688
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03030
DNA replication
tfl03410
Base excision repair
tfl03420
Nucleotide excision repair
tfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPIT_04100
03410 Base excision repair
RPIT_04100
03420 Nucleotide excision repair
RPIT_04100
03440 Homologous recombination
RPIT_04100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfl03032
]
RPIT_04100
03400 DNA repair and recombination proteins [BR:
tfl03400
]
RPIT_04100
Enzymes [BR:
tfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPIT_04100
DNA replication proteins [BR:
tfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RPIT_04100
DNA repair and recombination proteins [BR:
tfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RPIT_04100
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPIT_04100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
DNA_pol_A_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
AQP44095
UniProt:
A0A1Q2CDG5
LinkDB
All DBs
Position
913569..916244
Genome browser
AA seq
891 aa
AA seq
DB search
MTQSRKLLLIDGHSVAYRAFFALPVDNFATSTGQHTNAVFGFTSMLINVLRDEQPTHLAV
AFDVSRQSFRTTEYPEYKATRSASPTEFKGQVTLVKDVLDAMSIVHLEKDGYEADDLIAT
LSTQAVAEGFEVFIVTGDRDAMQLVNDHVTVLYPRKGVSDLARMTPQTVAEKYLVEPSRY
PELAALVGESSDNLPGVPGVGPKTAAKWLDQFDGLDNLVARAEQVPGKAGESFRTHLADV
VRNRRLNALLRDLALDISIDDTARREWDRERVHELFDALEFRVLRERLLELGPAEPVTVE
SFTVEGARLQEGQVRGWLAEHAVGRTAVHFAGTWGSGTGDLTALALAAADGAGAYLDTAE
LTPEDDAAVAEWLADPEHPKAVHGAKGPTLACWARGWQLDGVAQDTLLASYLLRPDQRTY
DLADLVLRHLQRELSTQESSPGDAQLAFDFTEDDAEAVDTALLHARAVFDLAEVLDRELD
ERNGTELMRSVELPLQTTLATMEKLGIAVEAGRLQSLRDDFDTSVASAQQAAFDVLGHEV
NLGSPKQLQGVLFDELGMPKTRRTKSGYTTDAEALESLYEKTQHPFLGHLLAHRDAIRLR
QTVDGLLAAVGDDGRIHTSYMQTIAATGRLSSTDPNLQNIPIRTAVGRRIRSAFVPGPEF
ESLMSADYSQIEMRLMAHASGDEGLIEAFGSGRDFHNEMASKVFRVEPEDVTGEMRAKIK
AMNYGLAYGLSAFGLSNQLKISVGEARELMDDYFSRVGGVKAYLEGIVEQARKDGYTETM
LGRRRYLPDLTSSNRQRREMAERAALNSPIQGSAADVIKVAMINVGRALRAEGLQSRMLL
QVHDELVFEVAPGEQEALTELAQREMAGAFSLRVPLEVSIGVGDSWESAAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaatcgcgaaagctgctcctcatcgacggccactcggtggcgtaccgggcattc
tttgcactgcccgtcgacaacttcgcgacgtcgacgggtcagcacaccaacgcagtgttc
ggtttcacctcgatgctcatcaacgtgctgcgcgacgagcagccgacgcacctggcggtg
gccttcgacgtctcccgtcagtccttccgcaccacggagtatccggagtacaaggccacc
cggtctgcctctccgaccgagttcaagggccaggtgacgctcgtcaaggacgtgctggac
gccatgagcatcgtccatctggagaaggacggctacgaggccgatgacctcatcgcgacg
ctgtcgacgcaggcggttgcggagggcttcgaggtgttcatcgtcaccggcgatcgggac
gcgatgcagttggtcaacgaccacgtgaccgtgttgtacccgcgcaagggtgtctcggac
ctggcgcggatgaccccgcaaaccgttgctgagaagtaccttgtggagccctcccgctac
ccggagctggcggcgctcgtcggggagagcagcgacaaccttccaggcgtacctggggtg
ggcccgaagacggccgcgaaatggctcgatcagttcgacgggctcgacaatctcgtcgcc
cgcgccgagcaggtgcctggcaaggccggcgaatcgttccgcacccatctcgccgacgtg
gtgaggaaccgccggctcaacgcactcctgcgtgatctcgccctcgacatcagcatcgac
gacacggcacggcgcgagtgggaccgggagcgggtccacgagctgttcgacgcgctggag
ttccgggtgctgagggagcgtctcctggagctcggccccgccgagccggtgacggtggag
agcttcaccgtcgagggggcccgcctccaggaggggcaggtgcgtggctggttggcggag
cacgccgtcgggcgcaccgccgtccacttcgcgggcacctgggggagcggcaccggcgat
ctgactgccctcgcgctggcagccgccgacggcgcgggcgcctacctcgacacggccgag
ctcacccccgaggacgatgccgccgtcgccgaatggctcgccgatcccgagcaccccaag
gcggtgcatggggcaaagggccccacgctggcctgctgggcgaggggatggcaattggac
ggggtggcgcaggatacgttgctcgcctcctacctccttcgcccggaccagcgcacctac
gatctggccgacctcgtgctgcgccacctccagcgggagctcagcacccaggagagctcc
cccggtgacgcgcaactggcgttcgacttcaccgaggacgacgcggaggccgtcgacacg
gccctgctccatgcgcgcgccgtgttcgacctcgcggaggtgttggaccgcgagctggac
gaacgcaacgggactgagctgatgcgctccgtggagctgccgctgcagacgaccctagcg
acaatggagaagctgggcatcgccgtcgaggcggggaggttgcagtcgctgcgcgacgac
ttcgacacgagcgtggcgtcggcccagcaggcggcgttcgacgtcctgggccacgaggtc
aacctcgggtcacccaagcaactccagggcgtgctgttcgacgagctggggatgccgaag
accaggcgcacgaagtcgggctacacgaccgacgcggaggcactcgagtcgctttacgag
aagacgcagcacccgttcctcggtcacctgttggcacaccgcgatgcgatccgactgcgc
cagacggtggacggtctcctcgccgcggtcggggacgacggccgcatccacaccagttac
atgcagacgatcgcggccaccggtcggctgagctcgaccgatcccaacttgcagaacatc
cccatccgcacggcggtcgggcggcggatcaggtctgcgttcgtcccgggtccggagttc
gaatcgctgatgtcggcggactactcgcagatcgagatgaggctcatggcgcacgccagc
ggggacgaggggctcatcgaggcgttcgggtcaggccgggacttccacaacgagatggcg
tccaaggtcttccgggtcgaacccgaggacgtcaccggggagatgcgggccaagatcaag
gccatgaactacggcctcgcctacggtctgagcgcctttgggctgtccaaccagctgaag
atctccgtcggtgaggcccgcgaactgatggacgactacttctcccgggtcgggggcgtg
aaggcgtacctcgaggggatcgtggagcaggcccgcaaggacggctacaccgaaacaatg
ctcggccgacgccgctatttgcccgacctcaccagcagcaaccgccagcggcgtgagatg
gccgagcgtgccgcgctcaattcgccgatccagggctccgctgccgacgtcatcaaggtg
gccatgatcaacgtgggacgcgcgctccgggcagagggtctgcagagtcggatgctcctt
caggtgcacgacgagctcgtgttcgaagtggcgccgggcgagcaggaggctctcaccgaa
ttggctcaacgggagatggccggcgccttctcgcttcgcgtgccccttgaggtctcgatc
ggggtcggcgactcgtgggagtcggccgcccactga
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