Tessaracoccus flavus: RPIT_04130
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Entry
RPIT_04130 CDS
T04688
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl00260
Glycine, serine and threonine metabolism
tfl00630
Glyoxylate and dicarboxylate metabolism
tfl00785
Lipoic acid metabolism
tfl01100
Metabolic pathways
tfl01110
Biosynthesis of secondary metabolites
tfl01200
Carbon metabolism
Module
tfl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RPIT_04130
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RPIT_04130
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RPIT_04130
Enzymes [BR:
tfl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RPIT_04130
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF6284
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AQP44100
UniProt:
A0A1Q2CDE5
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All DBs
Position
complement(921345..924173)
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AA seq
942 aa
AA seq
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MGTWQATAYDPDDFANRRHIGPSPAEMARMLDAVGVSSLDELIDQTIPADFRQDQPLSWP
PLTEAGMLSELRRVAARNHVRTSLIGQGYYGTVTPPAVQRNILENPAWYTAYTPYQPEIA
QGRLEALLNFQTMVSDLTGLEIAGASLLDEATAAAEAMTMAYNAGKGKKKRFFAADDLHP
QVLAVLATRALPLGIEVVSGPVEDLVAEDVFAAIVAYPGTDGHVRDFTDQCAALHEAGAL
AIVDADLLALCLIKEPGAMGADIAVGSAQRFGVPMGYGGPHAAYLSCRDSLKRLMPGRLV
GVSKDASGNRAYRLALQAREQHIRREKATSNVCTAQALLAVMASFYAVFHGPEGLRAIAQ
RVHLTAATLAQRLRAHGAAVEPAQFFDTITVEVGLGQAGILAAAEHRGINLRKVGRDKVG
ISVDETTTLDVVARVLDAFGVPEQPELSATPALAPEILRESEYLTHPVFHMNRAESEMMR
YMRRLSDRDLALDRAMIPLGSCTMKLNAAVEMMPITWPEFAELHPYAPQEQATGYREVIE
DLSAKLCEITGYDAFSMQPNSGAQGEYAGLLTIAAYHRARGEDRDVCLIPTSAHGTNPAS
AAMAGMRVVAVKADDHGNIDLEDFAAKAREAGDRLAAIMITYPSTHGVFEDTVRRVCDIT
HEYGGQVYIDGANLNAMVGLVRPGDLGGDVSHVNLHKTFAIPHGGGGPGMGPIGVKDHLR
AHLPSDPTSGEPGAVSGAMFGSASILLISWAYMRLMGGDGLTQATRVAILSANYLASRLE
GAYPILYRGANNRVAHECIVDPRGFAAHGVTVDDIAKRLVDHGFHAPTMSWPVAGTLMVE
PTESETLAELDRFVAAMLDIAREADDVVEGRVSADESPLRRAPHTVEDLLAEWDRPYSRE
QGCFPAGAFRVDKYWPPVGRVDNAFGDRNLVCACPPWEGTVS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggcacctggcaggccaccgcgtacgatcccgacgacttcgccaaccgccgccacatc
ggccccagtcccgccgagatggcgcggatgctggacgccgtcggcgtctcgtcgttggac
gagctcatcgaccagacgattccagcggacttccgtcaggatcagcccctgagctggccg
cccctcaccgaggcggggatgctttccgagctgcgtcgggtcgccgccaggaaccacgtg
cgcacctcgctcatcggccagggctattacggcacggtgacccctccagccgtccagcgc
aacatcctcgagaaccccgcctggtacacggcctacaccccctaccagccggagatcgcc
caagggcgcctggaagcgctcctcaacttccagaccatggtgagcgacctcaccgggctt
gagatcgccggcgcctccctcctggacgaagccactgcggccgccgaggccatgaccatg
gcctataacgccggcaaggggaagaagaagaggttcttcgccgctgacgatctacatccg
caggtcctcgcggtgctcgccaccagggcgctgccgttgggcatcgaggtcgtgtccggt
ccggtggaggacctcgtggcagaggatgtcttcgccgccatcgtcgcctacccgggcacc
gacggacatgtgcgcgacttcaccgaccagtgcgcagcgctccatgaggcgggggcgctg
gccatcgtcgacgccgacctgctggcactgtgcctcatcaaggagccgggggcgatgggc
gccgacatcgctgtgggttccgcgcaacggttcggagtgcccatgggatacggcggcccc
cacgccgcctacctgtcctgtcgggactcgctcaagcgcctgatgccgggcaggctcgtt
ggcgtctcgaaggacgcctccggcaaccgcgcctatcgcctggccctgcaggcgcgcgag
cagcacatccgccgggagaaggccacctccaacgtctgcaccgctcaggcgctgctggcg
gtgatggcgtcgttctacgccgtcttccacggcccggaggggctccgggccatcgcgcag
cgggtccacctgaccgcggcgaccctcgcccagcggctgcgtgcccacggggccgccgtg
gagcctgcccaattcttcgacaccatcaccgtcgaggtgggcctgggccaggccggcatc
ctcgccgcagcagagcatcgtggcatcaacctgcgcaaggtcggccgcgacaaggtcggc
atctccgtcgacgagacaaccacgctcgacgtggtggcccgcgtcctggacgccttcggg
gtgcccgagcagccggagctcagcgccacgcctgcgctcgcgccggagatcctacgcgag
agcgagtacctgacgcaccccgtgttccacatgaaccgggccgagtcggagatgatgcgc
tacatgcgccgcttgtcggaccgggatctcgccctcgaccgcgcgatgatcccgctgggc
tcgtgcacgatgaaactcaatgcggcagtggagatgatgccgatcacctggccggagttc
gcggagctccacccctacgcgccgcaggagcaggccactgggtaccgggaggtcatcgag
gatctgtcagccaagctgtgcgagatcaccggctacgacgccttctccatgcagcccaac
agtggagcccagggagagtacgccgggctcctgacgatcgccgcataccaccgcgcccgt
ggcgaggatcgcgacgtctgtctcatccccacctccgctcacgggacgaacccggcctcc
gctgcgatggccgggatgcgcgtcgtggcggtcaaggcggacgaccacggcaacatcgat
ctggaggacttcgccgcgaaggcgcgggaggccggagatcgcctggccgcgatcatgatc
acctacccctccacgcacggcgtcttcgaggacaccgtgcgccgcgtctgcgacatcacc
cacgagtacggcggacaggtgtacatcgacggcgccaacctcaacgccatggtcggcctc
gtccgaccgggcgacctgggcggcgacgtcagccacgtcaaccttcacaagaccttcgcc
atcccccacgggggcggaggtccgggcatggggcccatcggtgtgaaggaccatctgcgg
gcccacctgccgagcgacccgacgagcggagaacctggagcggtgtcgggggcgatgttc
ggttcggcctccatcctgctcatctcctgggcctacatgcggctgatgggcggcgacggc
ctcacccaggccacgcgggtggccatcctcagcgcgaactacctcgcttcgcggctcgag
ggggcctaccccatcctgtaccggggggccaacaaccgcgtcgcgcacgagtgcatcgtc
gacccacgtggattcgcagctcacggcgtgaccgtcgatgacatcgccaagcggctcgtc
gaccacggcttccacgcgcccaccatgtcctggcccgtagcgggcacgctgatggtggaa
ccgacggagtccgagactctcgcggagctggaccgcttcgtcgcggcgatgctcgacatc
gcccgcgaagccgatgatgtggtggagggaagggtgtccgccgacgagtcaccgctcaga
cgggcgccccacacggtcgaggacctcctggccgaatgggatcgaccctactcgcgcgag
caggggtgcttccccgccggcgccttccgggtggacaagtactggccgcccgtcggccgc
gtcgacaacgccttcggcgaccgcaacctggtgtgtgcctgccccccgtgggagggcacc
gtcagctga
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