Entry |
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Name |
(GenBank) excinuclease ABC subunit A
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KO |
K03701 | excinuclease ABC subunit A |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:tfl00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPIT_04165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:tfl03400]
RPIT_04165
DNA repair and recombination proteins [BR:tfl03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPIT_04165
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RPIT_04165
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
929068..931884
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AA seq |
938 aa
MRGARVHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARMFL
GQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARIGVPHCEVCGA
VIGRQTPQQIVDRLLGLEEGTRFQILAPLVRGRKGEHAELFRQLVGDGYSRVRIDGETFP
LTELPEIDKKRKHDVDVVVDRAVVRPTAKQRITESIETALGLAGGVVTIDFVDLPVDDPE
REKRYSEKLGCPNEHDVSIDELEPRQFSFNGPWGACPDCSGLGTLLDPDPELIIPNEDLS
LGEGAIAPWSSATIRSHYEHVLRSLGEEHGFSMDTPWSDLTAASRKLILGGVKGNVVVSY
RNRFGRVRSFSQKYEGIIPFVRRRYDEAETDAARDRWGGYMREINCATCGGARLKPSSLA
VTVAGRNIAEIAEMSIGEVAGFLGGLELTPREATIAARLVKEINARLRFLLDVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNLRLIETLHRLRDLGNT
LIVVEHDEDTIRASDWAVDIGPGAGEGGGEVVVSGTVQEMLDHPNSKTGAYLSGRLAIPV
PAVRRPGNGKKIVVRGAREHNLRGIDVEFKLGQFIAVTGVSGSGKSSLVNSILYTAAAKA
IYNSKAVPGRHKSLEGLEHLDKVIQVDQSPIGRTPRSNPATYTGVFDKIRNLFAKTPEAK
VRGYLPGRFSFNVKGGRCEHCMGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKG
KTIAEVLDMPISEAVEFFESIQSIARYLKTLTEVGLGYVRLGQPATTLSGGEAQRVKLAA
ELQKRSTGRTLYVLDEPTTGLHFEDIGRLLGVLQRLVDAGNTVVTIEHNLDVIKSADWII
DMGPDGGSRGGTVVATGTPEQVAANESSATGRFLAPLL |
NT seq |
2817 nt +upstreamnt +downstreamnt
gtgcggggagcccgcgtccacaacctcaagaacgtgtcgctcgatctcccgcgggattcg
ctgatcgtcttcacggggttgagcggctccggcaagtcgtcgctcgcgttcgacaccatc
ttcgccgagggccaacgtcgctacgtcgagtccctgagcgcctacgcccgcatgttcctc
ggtcagatggacaagcccgacgtcgacttcatcgagggtctctcgcccgcggtctccatc
gaccagaagtcgacgagccgcaaccccaggtcgaccgtcggcaccatcacggaggtctac
gactacctccggctcctctacgcccggatcggcgtcccgcactgtgaggtctgtggcgcg
gtcatcggccgccagacaccccagcagatcgtcgaccggctcctggggctcgaggaaggt
acgcgcttccagatcctcgcgccgctggtgcggggccgcaagggtgagcacgccgagctc
ttccggcaactcgtgggggacggctacagcagggtgcggatcgacggcgagacgttcccg
ctcaccgaactgcccgagatcgacaagaagcgcaagcacgacgtggacgtcgtcgtggac
cgcgcggttgtgcgtccgacggcgaagcagcgcatcaccgaatccatcgagaccgcgctc
ggcctcgccggtggtgtcgtcacgatcgacttcgtcgaccttcccgtcgatgatcccgag
cgagagaagcggtactccgagaagctcgggtgccccaacgaacacgacgtcagcatcgac
gagctggagccccggcagttctccttcaacggcccctggggggcgtgtcccgactgttcc
gggttgggcacgctgctcgatcccgacccggagctcatcatcccgaacgaggatctgtca
ctcggtgagggtgcgatcgccccctggagctcggccacgatccgctcccactacgagcac
gtcctccggtcgctgggtgaggagcacgggttctccatggacaccccgtggtcggatctg
acggccgcctcgcggaagctcatcctgggcggggtgaagggcaacgtcgtggtgagttac
cgtaaccgcttcggacgggtgcgctcgttctcgcagaagtacgagggcatcatccccttc
gtccgccgtcgctatgacgaagcggagaccgacgccgcccgcgaccggtggggcggctac
atgcgcgagatcaactgcgccacctgtgggggcgcccgcctgaagccgtcgagcctggcg
gtcaccgtcgccggccgcaacattgcggagatcgccgagatgtccatcggcgaggtggca
ggcttcctcggcggtctggagctgacaccgcgggaggccacgatcgcggcgaggctggtc
aaggagatcaacgcccggctgcgcttcctcctcgacgtcggcctcgactacctcacgctg
tcgcgggccgcgggcaccctgtcgggcggggaggcccagcgcatccgtctcgcgacccag
atcgggtccggtctcgtgggcgtcctctatgtgctggacgagccaagcatcgggctgcat
cagcgcgacaacctccgcctcatcgaaacgctccaccggctacgcgacctgggcaacaca
ctgatcgtcgtcgagcatgacgaagacacgatccgggcgtccgactgggcggtcgacatc
gggccgggggccggcgaggggggaggcgaggtcgtcgtctccggcaccgtgcaggagatg
ctcgatcatcccaactcgaagacgggtgcctacctctccggccgtcttgccatcccggtc
cccgcggtgcgccggccgggcaacggcaagaagatcgtcgtcaggggggcccgcgaacac
aacctccgtgggatcgacgtcgagttcaagctaggccagttcatcgcggtgacgggggta
tccgggtccggcaagtcgtcgctcgtcaactcgatcctctacaccgcggcggccaaggcc
atctacaactccaaagccgtcccgggtcggcacaagtccctggaagggctggagcatctg
gacaaggtgatccaggtggatcagtctccgatcggccggaccccgcgctcgaacccggcc
acgtacaccggggtcttcgacaagatccgcaacctcttcgccaagacgcccgaggccaag
gtgcgcggctacctgccgggccggttctccttcaacgtcaagggcgggcggtgtgagcac
tgcatgggtgacggcaccatcaagatcgagatgaacttcctgcccgacgtgtacgtgccg
tgcgaggtctgccacggggcccggtacaaccgcgagaccctcgaggtccactacaagggc
aagaccatcgccgaggtgctggacatgccgatcagcgaggcggtggagttctttgaatcc
atccagtcgatcgcgcggtatctcaagacgctgaccgaggtggggctgggctacgtgcgg
cttggccagcccgccacgacgctctccggtggcgaggcccagcgggtgaagctggcagcg
gaactgcagaagcgctcgacgggccgcacgctgtacgtgctcgacgagccgaccacaggc
ctccacttcgaggacatcggccggctgctcggcgtgctccagcggctcgtggatgcgggc
aacacggtcgtcacgatcgaacacaacctcgatgtgatcaagtcggccgactggatcatc
gacatggggcccgacggcggctcacgtggcggcactgtcgtcgcgaccggcacgcccgaa
caggtcgctgccaacgagtcgtctgcgacgggccggttcctcgcgccgcttctgtga |