KEGG   Tessaracoccus flavus: RPIT_04165
Entry
RPIT_04165        CDS       T04688                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
tfl  Tessaracoccus flavus
Pathway
tfl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RPIT_04165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfl03400]
    RPIT_04165
DNA repair and recombination proteins [BR:tfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RPIT_04165
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RPIT_04165
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 nSTAND1 AAA_16 AAA_21 RsgA_GTPase AAA_23 AAA_22 NACHT DnaJ_CXXCXGXG MMR_HSR1 Viral_helicase1 FtsK_SpoIIIE BCA_ABC_TP_C ExoX-like_C
Other DBs
NCBI-ProteinID: AQP46010
UniProt: A0A1Q2CIY4
LinkDB
Position
929068..931884
AA seq 938 aa
MRGARVHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARMFL
GQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARIGVPHCEVCGA
VIGRQTPQQIVDRLLGLEEGTRFQILAPLVRGRKGEHAELFRQLVGDGYSRVRIDGETFP
LTELPEIDKKRKHDVDVVVDRAVVRPTAKQRITESIETALGLAGGVVTIDFVDLPVDDPE
REKRYSEKLGCPNEHDVSIDELEPRQFSFNGPWGACPDCSGLGTLLDPDPELIIPNEDLS
LGEGAIAPWSSATIRSHYEHVLRSLGEEHGFSMDTPWSDLTAASRKLILGGVKGNVVVSY
RNRFGRVRSFSQKYEGIIPFVRRRYDEAETDAARDRWGGYMREINCATCGGARLKPSSLA
VTVAGRNIAEIAEMSIGEVAGFLGGLELTPREATIAARLVKEINARLRFLLDVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNLRLIETLHRLRDLGNT
LIVVEHDEDTIRASDWAVDIGPGAGEGGGEVVVSGTVQEMLDHPNSKTGAYLSGRLAIPV
PAVRRPGNGKKIVVRGAREHNLRGIDVEFKLGQFIAVTGVSGSGKSSLVNSILYTAAAKA
IYNSKAVPGRHKSLEGLEHLDKVIQVDQSPIGRTPRSNPATYTGVFDKIRNLFAKTPEAK
VRGYLPGRFSFNVKGGRCEHCMGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKG
KTIAEVLDMPISEAVEFFESIQSIARYLKTLTEVGLGYVRLGQPATTLSGGEAQRVKLAA
ELQKRSTGRTLYVLDEPTTGLHFEDIGRLLGVLQRLVDAGNTVVTIEHNLDVIKSADWII
DMGPDGGSRGGTVVATGTPEQVAANESSATGRFLAPLL
NT seq 2817 nt   +upstreamnt  +downstreamnt
gtgcggggagcccgcgtccacaacctcaagaacgtgtcgctcgatctcccgcgggattcg
ctgatcgtcttcacggggttgagcggctccggcaagtcgtcgctcgcgttcgacaccatc
ttcgccgagggccaacgtcgctacgtcgagtccctgagcgcctacgcccgcatgttcctc
ggtcagatggacaagcccgacgtcgacttcatcgagggtctctcgcccgcggtctccatc
gaccagaagtcgacgagccgcaaccccaggtcgaccgtcggcaccatcacggaggtctac
gactacctccggctcctctacgcccggatcggcgtcccgcactgtgaggtctgtggcgcg
gtcatcggccgccagacaccccagcagatcgtcgaccggctcctggggctcgaggaaggt
acgcgcttccagatcctcgcgccgctggtgcggggccgcaagggtgagcacgccgagctc
ttccggcaactcgtgggggacggctacagcagggtgcggatcgacggcgagacgttcccg
ctcaccgaactgcccgagatcgacaagaagcgcaagcacgacgtggacgtcgtcgtggac
cgcgcggttgtgcgtccgacggcgaagcagcgcatcaccgaatccatcgagaccgcgctc
ggcctcgccggtggtgtcgtcacgatcgacttcgtcgaccttcccgtcgatgatcccgag
cgagagaagcggtactccgagaagctcgggtgccccaacgaacacgacgtcagcatcgac
gagctggagccccggcagttctccttcaacggcccctggggggcgtgtcccgactgttcc
gggttgggcacgctgctcgatcccgacccggagctcatcatcccgaacgaggatctgtca
ctcggtgagggtgcgatcgccccctggagctcggccacgatccgctcccactacgagcac
gtcctccggtcgctgggtgaggagcacgggttctccatggacaccccgtggtcggatctg
acggccgcctcgcggaagctcatcctgggcggggtgaagggcaacgtcgtggtgagttac
cgtaaccgcttcggacgggtgcgctcgttctcgcagaagtacgagggcatcatccccttc
gtccgccgtcgctatgacgaagcggagaccgacgccgcccgcgaccggtggggcggctac
atgcgcgagatcaactgcgccacctgtgggggcgcccgcctgaagccgtcgagcctggcg
gtcaccgtcgccggccgcaacattgcggagatcgccgagatgtccatcggcgaggtggca
ggcttcctcggcggtctggagctgacaccgcgggaggccacgatcgcggcgaggctggtc
aaggagatcaacgcccggctgcgcttcctcctcgacgtcggcctcgactacctcacgctg
tcgcgggccgcgggcaccctgtcgggcggggaggcccagcgcatccgtctcgcgacccag
atcgggtccggtctcgtgggcgtcctctatgtgctggacgagccaagcatcgggctgcat
cagcgcgacaacctccgcctcatcgaaacgctccaccggctacgcgacctgggcaacaca
ctgatcgtcgtcgagcatgacgaagacacgatccgggcgtccgactgggcggtcgacatc
gggccgggggccggcgaggggggaggcgaggtcgtcgtctccggcaccgtgcaggagatg
ctcgatcatcccaactcgaagacgggtgcctacctctccggccgtcttgccatcccggtc
cccgcggtgcgccggccgggcaacggcaagaagatcgtcgtcaggggggcccgcgaacac
aacctccgtgggatcgacgtcgagttcaagctaggccagttcatcgcggtgacgggggta
tccgggtccggcaagtcgtcgctcgtcaactcgatcctctacaccgcggcggccaaggcc
atctacaactccaaagccgtcccgggtcggcacaagtccctggaagggctggagcatctg
gacaaggtgatccaggtggatcagtctccgatcggccggaccccgcgctcgaacccggcc
acgtacaccggggtcttcgacaagatccgcaacctcttcgccaagacgcccgaggccaag
gtgcgcggctacctgccgggccggttctccttcaacgtcaagggcgggcggtgtgagcac
tgcatgggtgacggcaccatcaagatcgagatgaacttcctgcccgacgtgtacgtgccg
tgcgaggtctgccacggggcccggtacaaccgcgagaccctcgaggtccactacaagggc
aagaccatcgccgaggtgctggacatgccgatcagcgaggcggtggagttctttgaatcc
atccagtcgatcgcgcggtatctcaagacgctgaccgaggtggggctgggctacgtgcgg
cttggccagcccgccacgacgctctccggtggcgaggcccagcgggtgaagctggcagcg
gaactgcagaagcgctcgacgggccgcacgctgtacgtgctcgacgagccgaccacaggc
ctccacttcgaggacatcggccggctgctcggcgtgctccagcggctcgtggatgcgggc
aacacggtcgtcacgatcgaacacaacctcgatgtgatcaagtcggccgactggatcatc
gacatggggcccgacggcggctcacgtggcggcactgtcgtcgcgaccggcacgcccgaa
caggtcgctgccaacgagtcgtctgcgacgggccggttcctcgcgccgcttctgtga

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