Tessaracoccus flavus: RPIT_04640
Help
Entry
RPIT_04640 CDS
T04688
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPIT_04640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfl03019
]
RPIT_04640
03016 Transfer RNA biogenesis [BR:
tfl03016
]
RPIT_04640
Enzymes [BR:
tfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RPIT_04640
Messenger RNA biogenesis [BR:
tfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RPIT_04640
Transfer RNA biogenesis [BR:
tfl03016
]
Prokaryotic type
tRNA degradation factors
RPIT_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
S1_RRP5
KH_5
Motif
Other DBs
NCBI-ProteinID:
AQP44191
UniProt:
A0A1Q2CDL4
LinkDB
All DBs
Position
1030902..1033103
Genome browser
AA seq
733 aa
AA seq
DB search
MEGQGIEFAEAVIDNGKFGKHTVRFEAGHLAQQADGSAAVYLNGDTMLLSATTAQKTPRE
SIDFFPLTVDVEERMYAAGRIPGSFFRREGRPGEGAILACRLIDRPLRPAFVKGLRNEVQ
VVVTILALNPSVMYDVVAVNAASMSTQIAGLPFSGPIGAVRVALIDDQWVAFPTVEQIEK
SAFQMVVAGRVLADGDVAIMMVEAGGTESTWEVVRSGKTAPTEEVVGEGLEAAKPFIKAL
CDAQSELAAKLPKETYDFPVFRDYEDDVFEAVSELAHDRVAEAMQIAGKQERDEATHAIR
MDVTEQLTERFPERLSEVSAALKALTKKIVRHRSLTEGVRIDGRGPSDIRTLSAEVEVIP
RVHGSALFQRGETQILGVTTLNMLDMEQKIDTLSPENTKRYMHNYNFPPYSTGETGRVGS
PKRREVGHGALAERALIPVLPPRQEFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNAGV
PLKSPVAGIAMGLMSEEVDGETKYVALTDILGAEDALGDMDFKVAGTRDFVTALQLDTKL
DGIPAVELQKALLQARDARHTLLDVMGEAIDAPDEMSPYAPRIISLRVPVDKIGEVIGPK
GKVINQIQDETGANIAIEDDGTVYVGADSGEAAEAAVAAINAIANPHMPERGERYLGTVV
KTTTFGAFVSLMPGKDGLLHISKLRPLAGGQRVESVDDVVSVGQKLQVEISDIDDRGKLS
LIPVIDEKDDAEA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggacaaggcatcgagttcgccgaggccgttatcgacaacggtaagttcggcaag
cacacagtacgtttcgaggcgggccacctggcccagcaggccgatggttcggctgccgtc
tacctcaacggcgacaccatgcttctgtcggcgacgaccgcccagaagaccccccgcgag
tccatcgacttcttccccttgacggtcgacgtcgaggagcgcatgtacgccgcgggccgc
atccccggctcgttcttccggcgcgagggtcgccccggcgagggcgccatcctcgcctgc
cgactcatcgaccggccgctgcgcccggccttcgtcaagggcctccgcaacgaggttcag
gtcgtcgtcaccatcctcgcgctcaacccgtcggtcatgtacgacgtggtcgcggtcaac
gccgcctccatgtccacgcagatcgccggtctgccgttctccggtcccatcggcgccgtg
cgcgtcgctctgatcgacgaccagtgggtcgctttcccgaccgtggagcagatcgagaag
tccgctttccagatggtcgtggcgggccgcgtgctggccgacggcgacgtcgccatcatg
atggtcgaggccggcggcaccgaatcgacctgggaagttgtccgctccggcaagaccgcc
cccaccgaagaggtcgtcggcgaagggctcgaggcggccaagccgttcatcaaggccctc
tgcgacgcgcagtccgagctggccgcgaagctgcccaaggagacctacgacttcccggtc
ttccgggactacgaggacgacgtcttcgaggccgtgtccgagctggcgcacgaccgcgtc
gccgaggcgatgcagatcgccggcaagcaggagcgcgacgaggccacccacgccatccgc
atggacgtgaccgagcagctcaccgagcgcttccccgagcgcctcagcgaggtctccgct
gccctcaaggctctgaccaagaagatcgtgcgtcaccgttccctcactgagggcgtccgc
atcgacgggcgtggcccgagcgacatccgcacgctttctgccgaggtcgaggtcatcccg
cgcgtccacggttccgctctgttccagcgcggcgagacccagatcctcggcgtgacgacg
ctcaacatgctcgacatggagcagaagatcgacacgctgtcgccggagaacaccaagcgc
tacatgcacaactacaacttcccgccgtactccacgggcgagaccggccgcgtcggttcc
ccgaagcgccgcgaggttggccacggtgcgctggcggagcgcgcgctgatcccagtgctt
ccccctcgccaggagttcccctacgcgatccgtcaggtgtccgaggctctcggctccaac
ggttcgacctccatgggctcggtgtgtgcctccacgctgtcgctgctcaacgccggtgtc
ccgctcaagtccccggtcgccggtatcgcgatggggctcatgagcgaggaggtcgacggc
gagaccaagtacgtcgcgctgaccgacatcctgggcgcggaggacgcgctcggcgacatg
gacttcaaggtcgcgggcacccgtgacttcgtcaccgcgctccagctcgacacgaagctg
gacggcatccccgccgtcgaactccagaaggcactgctgcaggctcgcgacgcccgccac
accctcctggacgtgatgggcgaggccatcgacgctcccgacgagatgagcccctacgca
ccgcggatcatctcgctgcgcgtcccggtggacaagatcggcgaggtcatcggccccaag
ggcaaggtcatcaaccagatccaggacgagaccggcgccaacatcgcgatcgaggacgac
ggcaccgtctacgtcggcgcggactccggggaggctgcggaggcggccgtcgcggcgatc
aacgcgatcgccaacccccacatgccggagcgtggcgagcgttacctcggcaccgtcgtc
aagaccacgacgttcggcgccttcgtgtcgctcatgccgggcaaggacgggctgctgcac
atctcgaagctccgcccgctcgcgggcggccagcgcgtcgagagtgtggacgacgtcgtg
tcggtgggccagaagctccaggtcgagatctccgacatcgacgatcggggcaagctgtcg
ctgatccccgtcattgacgagaaggatgacgccgaggcctga
DBGET
integrated database retrieval system
