KEGG   Tessaracoccus flavus: RPIT_05385
Entry
RPIT_05385        CDS       T04688                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
tfl  Tessaracoccus flavus
Pathway
tfl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    RPIT_05385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfl03400]
    RPIT_05385
DNA repair and recombination proteins [BR:tfl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RPIT_05385
SSDB
Motif
Pfam: Ku Zn_Ribbon_TF HHA
Other DBs
NCBI-ProteinID: AQP44314
UniProt: A0A1Q2CDW1
LinkDB
Position
1183101..1183910
AA seq 269 aa
MPRSIWKGSISFGLVSIPVKLYGATEDRDVSFRQVHSADGGRVRYQRVCEKCGEVLAYAD
IAKGYEAADGRIAILSDEDFENLPLRTLKSVDVVQFVDQDEVDPTYFQRTYFLEAEGPGQ
KPYVLLREALAKENKVAVVKVALRSRESLALVRAKDDLLLMHTMYWPDELRDGDFASPSS
EVTVTDAEMEMAKLLIGQLEGEFDPAEYTDSYREALLEVVEAKLAGTALPEQSDTSAPTG
DVVDLMAALKASVEAAKKRREDASAAKAG
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcctcgatccatctggaagggctcgatctcgttcgggctcgtctccatccccgtgaag
ctctacggtgccaccgaggaccgggacgtgagtttccgccaggtgcattcggccgacggg
gggcgcgtccgttaccagcgtgtctgcgagaagtgcggggaggtgctcgcctacgccgac
atcgccaagggatatgaggccgctgacgggcgcatcgcgatcctgagcgatgaggacttc
gagaacctgccgctgcgcacgctcaaaagcgtcgacgtggtgcagttcgtcgaccaggac
gaggtcgacccaacgtacttccagcgcacctacttcctcgaggcagaggggccggggcag
aagccgtacgtgctcctgcgggaggcgctggccaaggagaacaaggtcgccgtcgtgaag
gtggcgctgcgcagccgggagtctctcgcgttggtccgcgcgaaggacgatctcctcttg
atgcacacgatgtactggccggacgagctgcgtgacggggacttcgcctcgccgtcgagc
gaggtgaccgtcaccgatgccgagatggagatggctaagctgttgatcgggcaactcgag
ggggagttcgacccggcggagtacacggactcctaccgggaggcgctgctcgaggtggtc
gaagcgaaactcgcgggcaccgcattgcccgagcagtccgacacgtccgcccccacgggc
gacgtcgtcgacctcatggcggcgctcaaggcatcggtcgaggcggccaagaagcgccgc
gaggacgcgtccgccgcgaaggccggttga

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