Tessaracoccus flavus: RPIT_05435
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Entry
RPIT_05435 CDS
T04688
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03420
Nucleotide excision repair
tfl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPIT_05435
03430 Mismatch repair
RPIT_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfl03400
]
RPIT_05435
Enzymes [BR:
tfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPIT_05435
DNA repair and recombination proteins [BR:
tfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPIT_05435
MMR (mismatch excision repair)
Other MMR factors
RPIT_05435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AQP44323
UniProt:
A0A1Q2CDZ5
LinkDB
All DBs
Position
1193439..1196615
Genome browser
AA seq
1058 aa
AA seq
DB search
MTIHPIRPHLLSTPDQLVDALEIPFSDEQLTAITAPLEPAVIIAGAGSGKTTVMAARVVW
LVGTGQVKPEEVLGLTFTRKAAAELAHRVASALDRAGVLTGRDGEGAELVMTYDSFAARL
VSEFGLRLGIDRDPVMLTGASRFRLASRVVANAPGPFRSISRLSHHSIPERILALDSEMQ
SHLVSSEQVLAECDRAESRFAQAPLYRGKTMADVAKALDATAERRELLDLVDQYQELKRR
LGVVEFADQLREAVRLARQVPSIGRELRQRFKVVLLDEYQDTSAAQASLLRELFSGAGEP
DGHGFPVTAVGDPYQAIYGWRGAAAGNILDFPQHFRRADGRPAERQTLSINRRSGQRILD
VGNALAAGLRAAPGEAGVSLVAPPGASAAAVASATFDTFRDEVDWLAETVIARNAAGVAW
AEQAVLVRRNALLAPLFEALRLRDVPVEIVGLGGLLGLPEVAPLVATLRVIDDVTANPDV
AALLTGPRWALGLGDLEALGARARRLAAASAGPRGLTEALEHAVTQADPGEVVCLLDAVA
DPGDAALTDEGRRRVRAFHAEISMLRRHAAEPVADLVTRVVSTLGLEAELLAGGRQTSQV
ARFVAEVASYVDVDGDGTLSGLLAYLDAEEDFGEGLLQAVPTEADSVKLMTVHRAKGLEW
DTVYLPSLVDKVFPSEARSGVWPTRAMTLPAPLRGDASSVPQLRDYTKAGLAEYRDALKA
DHRLSEDRLAYVAATRAKEVLIVSSHIWTPGNVRPRRESPYFAVIKEVTQALGTHIDAAT
RGADHNPAPAEPVRALWPASFDEHVTAARRDGAQLVWQAADVLAARAQEPDEWAWESGTL
SAEDAALIESWDESAEHLTQLISRRHDRTVELPEGLSATALMALHNDPDQFATSLLRRMP
RQPSLAARVGSRFHEWLQDRFGLPAELEEQSAEGSPDSEELVRLVRAFEAGQFAHRTPIG
VEVPFLMNWGPHVLRGRIDAVYAWPHDGLEYLVVDWKTSTRAADPLQLAVYRQAWAEARG
VDPSRVGAAFYHVLTDHLRFVDAPASLIGTAFAAGLSS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccacccgatccgtccccacctcctgagcaccccagaccaactcgtcgatgcg
ctcgagatcccgttctccgacgagcagctcaccgccatcaccgctccactggaaccggcg
gtgatcatcgccggcgcgggtagcggcaaaacgaccgtgatggcggcccgggtggtctgg
ctggtcggcaccggccaggtgaagcccgaggaggtccttgggctcaccttcaccaggaag
gcggcggcggagttggcgcaccgcgtcgccagcgctctcgaccgtgccggcgtgctgacg
gggagggacggcgagggcgccgaactggtcatgacctacgactcgttcgcggcccgcctg
gtgagcgagttcggcctccgcctggggatcgaccgcgatccggtgatgctcaccggggcg
agccgtttccgcctggccagccgggtcgtcgcgaacgcacccgggccgttccgcagcatc
agcaggctcagccaccacagcatccccgagcggatcctggccctcgattccgagatgcag
tcacatctggtgagctcggagcaggtcctggccgagtgcgaccgggcggagagcaggttc
gcgcaggctccgctgtaccgcggcaagacgatggccgacgtggccaaggctctggacgcg
acggcggagcgacgggagctgctcgacctggtcgatcagtaccaggagctcaagcgcagg
ctgggggtggtcgagttcgccgaccagcttcgcgaggcggtccgtctggcccggcaggtg
ccgtccatcggccgggaactgcggcagcgcttcaaggtggtcctgctggatgagtaccag
gacacctcggcagcgcaggcctcactgctgcgggaactcttcagcggcgcgggggagccg
gacgggcacgggtttcccgtcaccgccgtcggcgatccctatcaggcgatctacggctgg
cgaggtgccgcggcgggaaacatcctcgactttccccagcatttccgccgcgccgacggc
cgtcccgcggagaggcagactctctcgatcaaccggcgcagcggccagcgcatcctcgac
gtcggcaacgctcttgccgcggggctccgcgccgcacccggtgaggcgggggtctcgctg
gtggctccgccgggggcctcggcggcggcggtggcctccgccaccttcgacacgttccgc
gacgaggtggactggctggccgagaccgtcatcgcccgcaacgccgccggcgttgcgtgg
gcggagcaggcggtgctcgtccgacgcaatgccctgctggctcccctcttcgaggcgctg
cgcctcagggacgtgcccgtggagatcgtggggctgggcggactgctcgggctccccgag
gtggcgccgctggtcgccaccctgcgggtgatcgacgacgtgacggcgaacccggacgtg
gcggccctcctgaccggaccgcgctgggcgctggggctcggggacctggaggcgttggga
gcgcgcgctcggcgtctcgccgccgcctccgccggaccgcgagggctcaccgaagccctc
gagcacgccgtgacgcaggctgatcctggggaggtggtgtgtctgctcgatgccgtggcc
gaccctggagatgccgcgctgaccgatgaggggcggcggcgggtgcgcgcgttccacgcg
gagattagtatgctgcgccgacacgccgcggagccggttgccgacctcgtgacgagggtc
gtgtcgactctcgggctcgaggcagagctgctggcgggtggtaggcagacgagccaggtg
gcccggttcgtcgctgaggtggccagctacgtcgacgtcgacggcgacggaaccctgtcc
ggtctcctcgcctacctcgatgcggaggaggacttcggtgagggactgctccaggccgtc
ccgacggaggccgactccgtgaagctcatgacggtgcaccgggccaagggcctcgagtgg
gacaccgtctacctcccgagcctcgtggacaaggtgttcccctcagaggcccgctcgggg
gtctggccgaccagggccatgactctccccgcgccactgcgaggtgacgcatcctcggtg
ccgcaactgcgcgactacaccaaggctggccttgccgagtaccgagatgcgctgaaggcc
gatcaccgcctctccgaagaccggctcgcctatgtcgcggcgacccgggccaaagaggtt
ctcatcgtgtcctctcacatctggacaccgggcaacgtcaggccgcggcgcgagtccccg
tacttcgcggtcatcaaggaggtcacccaggcgttgggcacccacatcgacgcggccacg
cgtggggcggaccacaacccggcgccggcggaaccggtccgggcgctctggcctgcctcc
ttcgatgagcacgtcaccgcagcgagacgtgacggcgctcaactcgtgtggcaggccgcg
gacgtgctggcggcccgtgcacaggaacccgacgagtgggcctgggaatccggcaccctc
tccgcggaggacgcggcgctgatcgagtcctgggacgagagcgccgaacacctgacccag
ctgatctcgcggcgccacgatcgcacggtggagttgccggaagggttgtcggccacggcg
ctcatggcgctgcacaacgatcccgatcagttcgcgacgtcgctgctgaggcggatgccg
cgtcagccgtcgctggctgcgcgggtcggctctaggttccacgaatggctgcaggaccgg
ttcgggctccctgcagaactggaggagcagagtgctgaggggtcgccggacagcgaggaa
ctggtccggttggtccgcgccttcgaggcggggcagttcgcccaccgcacccccatcggc
gtggaggtgccattcctcatgaactggggcccgcacgtcctgcgcggccggatcgatgcc
gtctacgcctggcctcacgacggtcttgagtacctggtcgtcgactggaagacgtcgacg
cgggccgcagatccgctgcagttggccgtctaccgccaggcctgggcggaggcccgtggg
gtggacccctcacgggtcggggctgcgttctatcacgtcttgacggaccatcttcgcttc
gtggacgcaccggcgtcgctgatcggtaccgcatttgcggcaggcttgtcgtcatga
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