Tessaracoccus flavus: RPIT_08685
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Entry
RPIT_08685 CDS
T04688
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RPIT_08685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfl03019
]
RPIT_08685
03009 Ribosome biogenesis [BR:
tfl03009
]
RPIT_08685
03036 Chromosome and associated proteins [BR:
tfl03036
]
RPIT_08685
Enzymes [BR:
tfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RPIT_08685
Messenger RNA biogenesis [BR:
tfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RPIT_08685
Ribosome biogenesis [BR:
tfl03009
]
Eukaryotic type
90S particles
RNase
RPIT_08685
Prokaryotic type
rRNA processing factors
RPIT_08685
Chromosome and associated proteins [BR:
tfl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RPIT_08685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AQP46094
UniProt:
A0A1Q2CJ16
LinkDB
All DBs
Position
complement(1866035..1866703)
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AA seq
222 aa
AA seq
DB search
MEQLGIEVDAQLFELSFTHRSYAYENGGVPSNERLEFLGDAVLQIVVTEHIFRTYPDLAE
GQLAKLRASVVSAVALAEVARSLDLGSLLLLGKGELTTGGRDKTSILADTFEAVIGAIHL
SCGPDASSRFIHALFDPLIASAEHRGDYTDHKTALQEICAQRGWSPPRYEITGTGPDHQR
VFTATVVLDERPFGSGSAPSKKQAEQIAARAAFRELSGAGTP
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ctggaacagctgggcatcgaagtcgatgcccagctgttcgagttgtcttttacgcaccgt
agctatgcgtacgagaacggtggcgtcccgtccaacgagcggttggagttcctcggcgat
gccgtcttgcagatcgtcgtcaccgaacacatcttccgcacctacccggatctggcggag
ggacaactggcgaagcttcgtgccagcgtcgtcagcgcggtcgcgctcgccgaggtggcc
cgcagcctcgatctgggcagcctccttctgctcggcaagggcgagttgaccaccggaggc
cgcgacaagacctccatcctcgccgacaccttcgaggccgtgatcggagccatccacctg
agctgtggaccagacgcctcatcccggttcatccacgcgctcttcgacccgctcatcgcg
tcggcggagcaccggggcgactacaccgatcacaagacggcgctgcaggagatctgcgcc
cagcgcggatggtcaccgccgcgttacgagatcaccggcaccggccccgaccaccaacgg
gtgttcaccgcgaccgtcgtcctggatgaacgaccgttcggatcaggttccgcgcccagc
aagaagcaggccgagcagatcgccgcccgtgcggccttccgggagctcagcggtgccgga
actccctga
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integrated database retrieval system