Tessaracoccus flavus: RPIT_09470
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Entry
RPIT_09470 CDS
T04688
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tfl
Tessaracoccus flavus
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfl03016
]
RPIT_09470
Enzymes [BR:
tfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RPIT_09470
Transfer RNA biogenesis [BR:
tfl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RPIT_09470
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AQP44984
UniProt:
A0A1Q2CFU6
LinkDB
All DBs
Position
complement(2032173..2032721)
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AA seq
182 aa
AA seq
DB search
MGKRMFTAVLPPEDVVQQIDTLVEPRREAAPDLRWRRPDGWHLTTSFMGSVPDSHLERLV
EELGAAAARTPRFVVRLSGGIAFPHAGKAKILALAAHGAEGGLDALARRCRSAANNAGVA
VDGATFVGHLTLARHNRGIEATRWLGILDSFPGWSWTADELVLIESHQVGRHYEVVERFA
LR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcggatgttcactgcggtgctgccgcccgaggacgtggtgcagcagattgac
acgttggtcgagccgcggcgggaggccgcgcccgacctgcgctggcggcggccggacggg
tggcacctcacgacgtcgttcatggggtcggtgcccgactcccacctcgagcgcctcgtc
gaggaactcggtgctgccgccgcgcgtacgccgagattcgttgtgcgcctgagcggcggg
atcgccttcccgcacgcggggaaggccaagatcctcgccctcgccgcgcacggtgcggaa
ggtgggctggacgcgctcgcccgtcgttgccggtcagcggccaacaacgcgggggtggcg
gtcgacggcgcgaccttcgtcgggcacctcacccttgcccgtcacaaccggggcatcgag
gccacgcggtggctggggatactcgattccttccccggctggtcctggacggccgacgaa
ctcgtgctgatcgagtcgcaccaggtggggcgccactacgaggtcgttgagcgcttcgcg
ctgcgctaa
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