Tessaracoccus flavus: RPIT_09880
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Entry
RPIT_09880 CDS
T04688
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03420
Nucleotide excision repair
tfl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPIT_09880
03430 Mismatch repair
RPIT_09880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfl03400
]
RPIT_09880
Enzymes [BR:
tfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPIT_09880
DNA repair and recombination proteins [BR:
tfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPIT_09880
MMR (mismatch excision repair)
Other MMR factors
RPIT_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
DEAD
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AQP45058
UniProt:
A0A1Q2CG12
LinkDB
All DBs
Position
complement(2117940..2120357)
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AA seq
805 aa
AA seq
DB search
MSDSLFPDLFSAFAPERTPRQEAGERPVAQGSGKRVSEDELLEGLNPPQREAVVHAGSPV
LVVAGAGSGKTRVLTRRIAHLVSQRDVHPGSILAITFTNKAAAEMRQRVVELVGNRAKLM
WVSTFHSACVRILRSDIDRFGMAKTFSIYDDADSKRLMSLVCRELEIDPKRYPVRAVMNK
VSNFKNELVDFERALAEADSPPRKVYAEAYAEYQRRLGAANALDFDDLIMTTVHLFQAFP
DVREKYRRRFRHVLVDEYQDTNHAQYALVRELCADVTTGVVPGSPVVEPAELMVVGDSDQ
SIYAFRGATIRNILDFESDFPGARTIVLDQNYRSTQNVLTAANSVISRNEGRREKHLWSE
LGEGDLIVGWVADTEQDEAQFVATEIDRLSDAGESQYGDTAVFYRTNAQSRAFEEVFIRV
GMPYKVVGGVRFYERREVRDAIAYLRAIVNPADDVSVRRILNVPKRGIGDRAEAAIATLA
AQERISFFDALQRAADAPGLASRSVRLIQGFVDLITMHRVMAAQGKPADEVLMSILKEST
YLSTLEASPDPQDITRVENLIELVSVASEFVAAANTVDLDDDAAMAGLAAGMPEPDDSLA
AFLERIALVADSDQLPDHDEGKGVVTLMTLHTAKGLEFDTVFLTGLEEGMFPHMRALTDP
NELEEERRLAYVGITRARKRLYLSRSQVRVTFGSPAYNPPSRFLQEVPAHVLDWRRTAAA
TTTWASSAATRNRQTSASIQSFGAGSGAPKSVPVLAVGDRVLHGSFGMGTVLALSGAGDK
TMADVDFGSAGAKRLSLKHAPMEKL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactccctgtttcccgacctgttctccgcgtttgcgccggagcgcaccccgcgt
caggaggcgggggagcgccccgtcgcccagggctcggggaaacgggtctccgaggacgag
ctgctggaggggctgaaccctccgcagcgcgaagctgtcgtccacgccgggtccccggtg
ctggtcgtggcgggggccgggtcgggcaagacgcgggtgctgacgcggcgcatcgcgcac
ctggtctcgcaacgcgacgtccaccccgggtcgatcctcgcgatcactttcacgaacaag
gcagccgcggagatgcgccagcgcgtcgtcgaactcgtgggtaaccgggccaagctcatg
tgggtctccaccttccattccgcctgcgtccgcatcctgcgctccgacatcgaccggttc
gggatggcgaagacgttttcgatctacgacgacgcggactcgaagcgcctgatgtcgttg
gtgtgccgcgagctcgagatcgaccccaagcgctacccggtgcgcgcggtgatgaacaag
gtgagcaacttcaagaacgagctcgtggacttcgagcgggcgctcgcagaagccgactcg
cccccacggaaggtctacgcagaggcgtacgccgagtaccagaggcggctgggggcggcc
aacgccctcgacttcgatgacctcatcatgacgacggtccatctcttccaggcgttcccg
gacgtccgcgagaagtatcgtcggcgcttccgccacgtgctggtggacgagtaccaggac
accaaccatgcccagtacgcgctcgtgcgggaactgtgcgcggacgtgaccaccggcgtg
gtccccggctcaccggtggtcgagcccgccgagctcatggtggttggcgactccgaccag
tcgatctacgccttccgaggcgccacgatccgcaacatcctggacttcgagagcgacttc
cccggggcgcggacgatcgtcctggatcagaactaccgctccacgcagaacgtgttgacg
gccgcgaactcggtgatctcccgcaacgagggccggcgggagaagcatctctggtccgaa
ctcggcgagggtgacctgatcgtcggctgggtggcggacacggaacaggacgaggcccag
ttcgtggcgaccgagatcgaccggctgagcgacgccggcgagagccagtacggcgacacc
gctgtcttctatcgcaccaacgcgcagtcgcgggcctttgaagaggtgttcatccgggtg
ggcatgccgtacaaggtcgtgggcggcgtccggttctacgagcgccgtgaggtgcgcgac
gccatcgcgtacctcagggccatcgtcaacccggcggacgacgtgtcggtgcggcggatc
ctcaacgtgcccaaacgggggatcggcgaccgggccgaggcggccatcgccaccctcgct
gcccaggagcggatcagcttcttcgacgcgctgcagcgcgctgcggacgcaccggggctg
gcgtcacgatcggtcaggctcatccagggcttcgtggacctcatcacgatgcaccgtgtg
atggcggcccagggcaagcccgccgacgaggtgctgatgtcgatcctcaaggagtcgacc
tatctttccacgctggaagcatcgcccgacccgcaggacatcacccgggtcgagaacctc
atcgaactggtctcggtggcctcggagttcgtggccgcggccaacacggtggacctggac
gacgacgccgcgatggccggtctggcggccggaatgccggagccggacgattcgctagcc
gccttcctggagcgcatcgcgctcgtggccgactctgaccagttgcccgaccacgacgag
gggaagggtgtggtcacgttgatgacgctgcacaccgcgaagggtctggagttcgacact
gtcttcctcactggccttgaggaggggatgttcccccacatgcgagcgctcaccgacccg
aacgagttggaggaggagcggcggctggcctacgtcggcatcacccgcgcccgcaaacgc
ctctacctgagccgatcgcaggtgcgggtgacgttcggctcgccggcctacaatccgccg
tcacggttcctccaagaggtgccggcgcacgtcctcgactggcgccgtaccgcggccgcg
accacaacgtgggcgagctcggctgcaacgaggaaccggcagacgtcggcgtccatccag
agcttcggtgccggctccggcgctcccaagtcggtgcccgttctggcggtgggcgaccgc
gtgctccacggttcgttcggcatggggacggtgctggcgctgagcggcgcaggggataag
accatggccgacgtcgacttcggttcggcgggcgcgaagaggttgagcctcaagcacgcg
ccgatggaaaagctctga
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