Tessaracoccus flavus: RPIT_09965
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Entry
RPIT_09965 CDS
T04688
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPIT_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfl03019
]
RPIT_09965
03110 Chaperones and folding catalysts [BR:
tfl03110
]
RPIT_09965
03029 Mitochondrial biogenesis [BR:
tfl03029
]
RPIT_09965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfl04147
]
RPIT_09965
Enzymes [BR:
tfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RPIT_09965
Messenger RNA biogenesis [BR:
tfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RPIT_09965
Chaperones and folding catalysts [BR:
tfl03110
]
Heat shock proteins
HSP60 / Chaperonin
RPIT_09965
Mitochondrial biogenesis [BR:
tfl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RPIT_09965
Exosome [BR:
tfl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RPIT_09965
Exosomal proteins of other body fluids (saliva and urine)
RPIT_09965
Exosomal proteins of breast cancer cells
RPIT_09965
Exosomal proteins of colorectal cancer cells
RPIT_09965
Exosomal proteins of bladder cancer cells
RPIT_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF1192
SH3_7
Motif
Other DBs
NCBI-ProteinID:
AQP45074
UniProt:
A0A1Q2CG40
LinkDB
All DBs
Position
complement(2136642..2138222)
Genome browser
AA seq
526 aa
AA seq
DB search
MPKILAFDEEARRALERGVDALANTVKVTLGPKGRYVVLDKKWGAPTITNDGVTVAKEVE
LDDPYEDLGAQLAKEVATKTNDVAGDGTTTATVLAQAMVHQGLRAVAAGANPVGLKRGID
KAVEAVVERLRENARPVDTTADMASVATISSRDEQIGALIAEAFDKVGKDGVITVDESNT
FGTDLEFTEGMQFDKGYLSPYFVTDADRMEAVLEDPYILIHSGKISSMNDLLPLLEKVIA
AKGTLFIVAEDVDGEALSTLVVNKIRGTFTSVAVKAPAFGDRRKAMLEDIAILTGGQVVA
PEVGLKLDQVGLEVLGRARRIVVTKDNTTIVDGHGEHSEVAGRVAQLRAEIERTDSDWDR
EKLQERVAKLAGGVCVIKVGAATEVELKEKKHRIEDAVSATRAAIEEGIVAGGGSALIHA
GAVLKDGLGFQGDEKAGVSVVAKALAEPLRWIAENGGEAGYVITAKVAELEVGHGYNAKI
GEYQNLVENGVIDPVKVTRSALANAASIASLLLTTETLVVDKPEED
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagattctcgctttcgacgaggaggcccgccgcgcgctcgagcgtggtgtcgac
gccctcgccaacaccgtcaaggtgacgctgggccccaagggccgctacgtcgttctcgac
aagaagtggggagccccgaccatcaccaacgacggcgtcaccgtcgccaaggaggtcgag
ctcgacgatccctacgaggatctgggagcccagctcgccaaggaagtcgccaccaagacc
aacgatgtcgccggcgacggcaccaccaccgccaccgtcctggcacaggccatggtccac
cagggccttcgggctgtcgccgcaggcgccaaccccgtcgggctcaagcgcggcatcgac
aaggccgtggaggctgtcgtcgagcgcctgcgtgagaacgcccggcccgttgacaccacc
gccgacatggcgtcggtcgccaccatctcgtcgcgcgacgagcagatcggcgccctgatc
gccgaggccttcgacaaggtcggcaaggacggggtcatcacggttgacgagtccaacacg
ttcggcaccgacctcgagttcaccgagggcatgcagttcgacaagggctacctctcgccg
tacttcgtgaccgacgccgatcgcatggaggccgtgcttgaggatccgtacatcctgatc
cacagcggcaagatctcctcgatgaacgatctgctcccgctgctggagaaggtcatcgcc
gccaagggcaccttgttcatcgtggccgaggacgtcgacggagaggctctgtccacgctc
gtggtcaacaagatccgtggcaccttcacgtcggtggctgtcaaggctcccgccttcggc
gatcgccgcaaggccatgctcgaggacatcgccatcctcaccggcggccaggttgtcgcc
cccgaggtgggcctcaagctcgaccaggtcggtctcgaggtgctcggccgcgcccggcgc
atcgtcgtcacgaaggacaacaccacgatcgtcgacggccacggggagcactccgaggtg
gccggtcgcgtcgcgcagctgcgtgccgagatcgagcgcaccgattccgactgggaccgt
gagaagctgcaggagcgagtcgccaagctcgccggcggcgtctgcgtgatcaaggtcggc
gccgccaccgaggtggagctgaaggagaagaagcaccgcatcgaggacgccgtctcggcg
acccgtgcggcgatcgaggaaggcatcgtcgcaggaggcggttccgccctcatccacgcc
ggtgcagtcctgaaggacggcctcggtttccagggcgacgagaaggcgggtgtctccgtc
gttgcgaaggcgctggccgagccgctgcgctggatcgctgagaatggcggtgaggcgggc
tacgtcatcacggccaaggtcgcggagctcgaggtcggtcacggctacaacgcgaagatc
ggcgagtaccagaacctcgtcgagaacggcgtcatcgaccccgtcaaggtgacccgctct
gcgctcgcgaacgccgcgtcgatcgcttcgctgctgctgaccaccgagacgctcgtggtc
gacaagcccgaagaggactga
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