Tessaracoccus flavus: RPIT_11200
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Entry
RPIT_11200 CDS
T04688
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPIT_11200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfl03019
]
RPIT_11200
03110 Chaperones and folding catalysts [BR:
tfl03110
]
RPIT_11200
03029 Mitochondrial biogenesis [BR:
tfl03029
]
RPIT_11200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfl04147
]
RPIT_11200
Enzymes [BR:
tfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RPIT_11200
Messenger RNA biogenesis [BR:
tfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RPIT_11200
Chaperones and folding catalysts [BR:
tfl03110
]
Heat shock proteins
HSP60 / Chaperonin
RPIT_11200
Mitochondrial biogenesis [BR:
tfl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RPIT_11200
Exosome [BR:
tfl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RPIT_11200
Exosomal proteins of other body fluids (saliva and urine)
RPIT_11200
Exosomal proteins of breast cancer cells
RPIT_11200
Exosomal proteins of colorectal cancer cells
RPIT_11200
Exosomal proteins of bladder cancer cells
RPIT_11200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AQP45292
UniProt:
A0A1Q2CGP6
LinkDB
All DBs
Position
complement(2393869..2395500)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKLIEFNEEARRALERGMNTLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVIAQAMVREGLRNVTAGANPMGLKKGIE
TAVTAITEKLAEMAIDVETKEQIAQTASISAADTGVGEIIAEAMDKVGKEGVITVEESNT
FGLDLELTEGMRFDKGYISPYFVTDAERMEATLDDPYILLVNSKVSSLKDLLPVLEKVMQ
SGKPLLVIAEDVEGEALAGLIVNKIRGTFKSIAVKAPGFGDRRKAMLTDIAILTGAQVIS
EEVGLSLDAVSLDLLGQARSVMVTKDETTIIEGAGESAQIEGRVAQIRREIENSDSEYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALLQA
SKAAKVDGLTGDEAVGAQIVFTAASAPLKQIAANAGLEGGVVAEKVSHLAVGEGLNAATG
EYVNMVEAGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAPAMPGGDDMGGMGGM
GGF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagctgattgaattcaacgaagaggcgcgtcgcgctctcgagcgtggcatgaac
acgctcgccgacgccgtcaaggtgacgcttggtcccaagggccgcaacgtcgtcctggag
aagaagtggggagcccccaccattaccaacgacggcgtctccatcgccaaggagatcgag
ctcgaggatccctacgagcgcatcggcgccgagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgcgggcgacggcaccaccaccgccacggtcatcgcccaggcgatggtccgc
gagggtctccgcaacgtcacggccggcgcgaacccgatgggcctgaagaagggcatcgag
accgctgtcaccgcgatcaccgagaagctggccgagatggccatcgacgtggagaccaag
gagcagatcgctcagaccgcctccatctccgccgccgataccggcgtcggcgagatcatc
gccgaggcgatggacaaggtcggcaaggagggcgtcatcacggtcgaggagtcgaacacg
ttcggcctcgatctcgagctcaccgagggcatgcggttcgacaagggttacatctccccg
tacttcgtcacggacgcggagcggatggaagcgaccctcgacgacccctacatcctgctc
gtcaactcgaaggtctcctcgctcaaggacctcctgcccgtgctcgagaaggtcatgcag
tccggcaagccgctgctggtcatcgccgaggacgtcgaaggtgaggccctcgccggtctc
atcgtcaacaagatccgtggcaccttcaagtcgatcgccgtcaaggcgcccggcttcggt
gaccgtcgcaaggccatgctgaccgacatcgcgatcctcaccggcgctcaggtcatctcc
gaagaggtcggcctctcgctcgacgccgtgtcgctcgacctgctcggccaggcccggtcg
gtcatggtcaccaaggacgagaccaccatcatcgagggcgccggcgagtcggctcagatc
gaaggccgcgtggcccagatccgtcgcgagatcgagaactccgactccgagtacgaccgc
gagaagctccaggagcgcctcgccaagctggccggcggcgtggccgtcatcaaggtcggc
gcggccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcggccgtcgaggagggcatcgtccccggcggtggcgttgcgctgctgcaggcg
tcgaaggccgcaaaggtcgacggcctgaccggtgacgaggctgtcggcgcgcagatcgtg
ttcacggctgcatccgccccgctcaagcagatcgctgcgaacgcgggtctggagggcggc
gtcgtcgctgaaaaggtttcgcacctggctgtcggcgaaggcctcaacgcggccaccggc
gagtacgtcaacatggtcgaagccggcatcatcgatccggccaaggtcacccgttccgcg
ctgcagaacgcggcgtcgatcgcggccctgttcctcaccaccgaggccgtcatcgcggac
aagcccgagaaggctcccgcgatgcccggtggcgacgacatgggcggcatgggcggcatg
ggcggcttctga
DBGET
integrated database retrieval system
