Tessaracoccus flavus: RPIT_12815
Help
Entry
RPIT_12815 CDS
T04688
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
tfl
Tessaracoccus flavus
Pathway
tfl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPIT_12815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
IgGFc_binding
Big_9
PKD
Cadherin_5
Cadherin_4
K319L-like_PKD
Big_1
Cadherin_3
REJ
DUF11
Motif
Other DBs
NCBI-ProteinID:
AQP45578
UniProt:
A0A1Q2CHH9
LinkDB
All DBs
Position
complement(2758719..2765219)
Genome browser
AA seq
2166 aa
AA seq
DB search
MSIRIFPWVRIWAALVAILLAIGLAVVGTAPARGAVTSANPADGFGELYADFTTADALFA
WVTTDTRGGRVCVIAATGNGDCENPAWGTPNTIVGIGTLFTLLEGPSLPMGTYRLHTESA
TEEGWLPGYTSDVFTVGPCQSDCDTTIGRQQAEAFKAASGDATAGASLLCTALTLKETGS
TIQTHGDGIRLGLEAAGSRSLSGGFLGYATGLGLGFAGIELPSYNDAALQIAQMMSCMVR
QMHLDIANDPPDPILNTVVPPAFLEPDPLGSPVLDDLVAALDRQTAYGIATRIAFERYQG
AVLAEDLSGQRLQAGAIAEYGRSLIRELRATADALRAAAASSDSAMAGVVLEDGSTLEAL
VPLAERVTTSGFTEGETQQLRELGLTDQQIANAATWFGLDLDVVSPGVPLSQYLVEAAET
FEAAIEPTDEFVRNAAAVSTTDLAPPSAGITASFQSPATWRLTATGTSSDGDPVEHTWRF
SDGHVATGQEVERAFEESGAYSVTVTTTETTPWGGSATATNETLTVQLNDPPRAVDDRIN
VALGDSVSFNPLANDIDYDGDPLTLDGTDAAAGGTLTCTPAGPCTYAADRGVVGEESIEY
RVSDGTDTSSGAILVTIVAADSAPVASDVAVSVPRGATTTVALPATDPVPGPQTPLVMEV
VGEVPPGFTVTPFYPASARVAVSWSAPLGAQTISYRVSDGAQWSPVATLTVTVLGENRTP
TAPDMTVTTPAGTPVAITLDGSDPDGNTLSWTHSSPTAGSITGTAPNLILDPGESAPGSV
ITFTYQVSDGLQYSGTATVTVDVGPWPGGPIVNLGDDLHLGEGPISFYATARAPEGAGPL
TYLWDFGDGRTSSASSPYVTFDDGVYEVTLTVTDALGRAASDTVTMTIRNLPPVARIGVT
SGPYVTGRQLTLNSASSRDPGDDVLTYRWDLGDGVLVDTEDAYLPHVFDTGGLHRIQLIA
IDDDGAQSNTWLDLDVAAFDVSAGGDREVPEGSWITFEGSAPFQPFGSSAHWEWDLGDGT
LVTGSTPIRHRYAGDEPRTVTFRATLDGVSREDVATVTFTNLPPRLGPAIPVVVEAGQPS
VLHAGAFDPGGDPLTIAWDLGDGTSATGQHVTHAWSAPGGKTVRITATDDEGADVAAEVQ
VLVLEDGALGRVTPDSRGRAFHLAFDPNMSKEGSEQYLVITGEANSTGVVSVPGIGFRAE
FVVGAGSIATVRLPDDVLPDPDGRTDTVRTAVDPLAVIVQAREEVTVYGVNKETSSTDAF
LAVPDDVAGTDLRVPGGATQFSVVSLQSGTEITVTNPQRVESVIGPLEAGEVFRKAGYPS
NIQGSLIQAEVPVQVLAGAPCAMVPDQVTFCDHLVEAMWPTSAWGTSFLTWPLEGRTGGD
PVDVLAGDDETEVRVDGELVATLGAGFAHRMLRTSGTLIETSKPAMVNQLARGTTADRQM
GDPLMMLIPPQEQWLDRYTVASLRGFDKHYLNLVIKDGAQSTVRLDGAIVEQGLWEAVGS
SGYVAAAVEVSSGQHRIVADRPVAVYAYGWAPYESYGYPGGLALAPVADVDRLSLSPAAA
ERQVGTTDCVVATVLNSAGEPLSGVRVDLAVSGVHTTEAYGWTDDDGTASLCYEGHLSGT
DELVASVGAVTASAARTWTDQQIPGQPPVASDIAASTDHETPVELVLTATDEDGDTLSFA
ILTHPLNGTLGEVTGNRVTYTPNPGFSGEDSFTFAASDGTFTSVSAVASVTVRPPAGPVP
TAVSVAPDTQTAEVGDESCVVATVLDAEGYSMTGVSVTATVTGANAGALMAEAATNGEGN
ARVCYTGSSAGTDTIAVRAGDVAGEATVEWRDLLPSAQLSVTVTPTSVAEPGGPVTWTVR
VTNGSEETATMTALSDPAGSLQGRGTCEVPQQVEGFASYTCTFSEEISGTGGQSYSRSFA
VKLADDDGNHSTDEFTAKVEILAVEQPEPPVATITQAPDAVTSSRTATFAFTADQPGATF
ECALDDGPLTACVTPVSYHNLGDGDHRFVVRAIGQAGAGRVAEHTWTIEARTPPPRDLYE
TPGYHDSGGRQWFTRCEPYSQTTRCWTYIWATTIERVGNHYVTSNGWVFNNLTYVASPKR
LWVGNPLAITGSWTDTDGRRWRTECNTPTSGGNGCRSYVTTKVLEATPTGPRFVLRERFN
NIVRFS
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcgaatctttccctgggtacgcatctgggccgctcttgttgcgatcctgctg
gcgatcggcctggcggtggtgggaaccgccccggcgcggggggcggtgacaagcgccaac
ccggcggacggattcggtgagttgtacgcagacttcacgacggccgacgcgctgttcgcc
tgggtcacgaccgatacccgcgggggccgcgtctgtgtgatcgcggccacggggaacgga
gactgcgagaacccggcctggggcacaccgaacacgatcgtgggcatcggcaccctgttc
acactcttggagggaccgagccttccgatgggcacataccgtctccacaccgagtcggcc
accgaagaggggtggctgcccggctacacctccgacgtgttcaccgtggggccctgccag
agcgattgcgacaccacgatcgggcgtcagcaggctgaggccttcaaggcagcctcgggg
gatgccaccgccggcgcctcgctgctctgcaccgcgctcacgctgaaggagaccgggagc
accatccaaacccatggcgatgggatacgtctggggcttgaggcggccggctcgagaagt
ctcagcggcggattcctcggctacgccaccggtctgggtctggggttcgccgggattgag
ctgccgtcgtacaacgatgctgcgctgcagatcgcccagatgatgtcgtgcatggtccgg
cagatgcacctggacatcgcgaacgatccaccggatccgattctcaacaccgtcgtacca
ccggcattcctcgagcctgatcccctcggctcgccggtgctcgacgacctcgtcgccgcg
ctcgaccgtcagaccgcgtacggcatcgccacgcgcatcgccttcgagaggtatcagggc
gccgtgctggctgaggacctctctggccaacgactgcaagccggcgcgatcgccgagtac
ggcagatctctgatccgggaactgcgtgccaccgcggacgcgctacgagccgccgccgcg
tcgtccgacagcgcgatggccggcgtagtgctcgaggacggctcgactctcgaggcgctc
gtgcctctggcggagcgcgtcaccacctcaggattcaccgaaggtgagacccaacaactc
cgcgagttggggctgaccgaccaacagatcgccaacgcggccacgtggttcggcctcgac
ctcgacgtcgtctctcccggagtgccgctgtcgcagtatctcgtggaggcggccgaaacc
ttcgaggccgcgatcgagccgaccgacgagttcgtgcgcaacgcggccgcggtctccacc
acagacctcgccccgcccagcgctgggatcacggcgtcgttccagagccccgccacctgg
cggctcaccgctaccggaaccagctcggacggcgacccggtggagcacacctggcgcttc
tccgacggccatgtcgcaaccggccaagaggtcgaacgcgccttcgaggagtcgggtgcg
tactccgtgacggtgaccaccacggagaccacaccctggggagggtcagccaccgccacc
aatgagacgctgactgtgcaactgaacgaccctccccgtgcggtggacgaccgcatcaac
gtggcactgggagactcggtgtcgttcaacccgttggccaatgacatcgattacgacgga
gatccattgaccctcgacggcacggatgcggcagcgggaggaacgctcacctgcactcct
gctggcccgtgcacgtacgcggccgacagaggcgtcgttggcgaggagtccatcgagtac
cgcgtgtccgatggcacggacacgagtagcggcgcaattctggtcacgatcgtcgcggcc
gactccgcccccgtcgcctctgacgtggccgtcagcgttccgcgtggagccaccacgact
gtcgcattgccggcgaccgacccggtaccgggcccgcagaccccgttggtcatggaagtt
gttggggaggtcccgcccggtttcaccgtcacccccttctatccggcgtcggcacgggtg
gccgtctcgtggagtgctcccctgggtgcgcagacgatttcctaccgcgtgagtgacggc
gcgcagtggtcgcccgtggccaccctcaccgtcactgtgctcggagagaaccggacaccg
acagcgccggacatgaccgtgaccaccccggcgggcactcccgtggcgatcacgctcgac
ggctccgatccggatggcaacaccctgtcctggacacattcgagtccgaccgcgggcagc
atcaccggcaccgcccccaacctcatcctcgacccgggagaatcggcgcccggaagcgtc
atcaccttcacctaccaggtcagtgatggtctccaatattccggcactgccaccgtcacc
gtcgacgtcggaccatggccgggcggcccgatcgtgaacctgggggacgacctgcatctg
ggcgagggcccgatcagcttctatgccacggcccgggccccggagggggctggcccgctc
acgtacctttgggactttggggatggccggacgtcgagcgcctcctcgccctatgtcacc
ttcgacgatggtgtgtacgaggtgacgttgaccgtcacggatgcgctggggcgtgcagcc
tcggacacggtgaccatgacgattcgcaatctgccgcccgtggcacggatcggcgtcacg
tccggcccctacgtgaccggacggcagctcaccctcaactcggccagcagcagggacccg
ggagacgacgtgctgacgtaccgctgggatctgggcgacggcgtcctggtggacacggag
gacgcctacctgccccacgtgtttgacactggagggctacaccggatccaactcatcgct
atcgacgacgacggagcccagtccaacacctggttggacctcgacgtggcggcgttcgac
gtgagcgccgggggcgacagggaggttccggagggctcctggatcacgttcgaaggctcg
gctcctttccagcccttcggcagcagcgcccattgggagtgggacctgggcgacggcacg
ctggtcaccggctccacgccgatccggcaccgctacgccggagacgagccgagaaccgtc
acattcagggccacgctggacggggtgtcgcgggaggacgtcgccacagtcaccttcacc
aatcttccgccacggctcggcccggccattccagtggtggtggaagccggccagccgtcg
gtgctgcatgcgggagccttcgacccaggcggcgatccactgaccatcgcctgggacctg
ggcgacggcacctccgcgaccggccagcacgtcacgcacgcctggtcggcccccggtggc
aagaccgtccggatcaccgcgaccgatgacgagggagccgacgtcgccgctgaggtgcag
gttctcgtactggaggacggggcgctgggcagggtcacgcccgactctcggggccgggcg
tttcatctggcgttcgaccccaacatgtccaaggagggatccgagcagtacctcgtcatc
acgggcgaggcgaacagcaccggcgtggtctccgttcccggcatcgggttccgcgcggaa
ttcgtggtcggggccgggagtatcgccacggtccgcctgccggacgatgtccttcccgac
ccggacgggcgaacggacactgtcaggaccgccgtcgatccgctcgcggtgatcgtgcag
gcgcgtgaagaggtcacggtctacggggtcaacaaggaaacctcatccacggatgcgttc
ctcgcggtgcccgatgatgtggcgggcaccgacctccgggtccccggcggcgcgacgcag
ttctcagtcgtctccctgcagtcgggcacggagatcaccgtgaccaatccgcagcgcgtc
gagagcgtgatcgggcctctagaggcgggagaggtgttccggaaggcgggctatccctcc
aacatccaggggtccctcatccaggccgaggtccccgttcaggtgctcgcgggcgccccc
tgcgcgatggttcccgaccaggtgacgttctgtgaccacctcgtagaagccatgtggccc
acctcggcctgggggaccagtttcctgacctggcctctggaagggcgcacggggggagac
cccgtcgatgtgctcgccggagacgacgagactgaggtgagggtcgacggggagctcgtc
gcgacgctcggtgcgggcttcgcccacaggatgctccgaacctctggaaccctcatcgag
acctccaaaccggccatggtgaaccagttggcccggggcaccacggctgaccgccagatg
ggcgatccgctcatgatgctgatcccgccgcaggagcagtggctggaccgatacaccgtg
gcgtccctgcggggcttcgacaagcattatctgaacctcgtcatcaaggacggcgcacag
agcacggtccggctcgacggggcgatcgtggagcaggggctgtgggaggccgtcgggtcg
tccggttatgtggccgccgccgtcgaggtcagctccgggcagcaccgcatcgtcgccgac
cggccggtcgcggtttacgcctacgggtgggccccgtacgagtcctacggctaccccggt
ggcctcgccctggccccagtggcggatgtggatcgactttcgctctccccagcagctgcc
gaacggcaggtgggaaccactgactgcgtggtcgccaccgtgctcaacagtgcaggcgaa
cccctctccggcgtgcgcgtggatctcgcggtctcaggcgtgcatacgacggaggcgtac
ggctggaccgacgacgacggtacggcgtcgctctgttacgaaggccacctgtcggggacc
gacgaactggtggcgtcggtgggcgctgtgacagcgtcggccgcgcgcacgtggaccgat
cagcagatacccggccaaccgcccgtggccagcgatatagctgcgagcactgatcatgag
acgccggtggaactggtcctcaccgccaccgacgaagacggcgacaccttgtcgttcgcc
atcctcacccatcccttgaacggaacgctgggagaggtcactggcaaccgcgtgacgtac
accccgaacccaggattcagcggcgaggactcgttcacgttcgcggcgagcgacggtacc
ttcacgtcagtgtccgccgtcgcctctgtcacggtgcgtccacccgccggaccggtacca
acggctgtgtcggtcgcgcccgatacccagaccgccgaagtgggggatgaatcctgcgtg
gtggccaccgtgctcgacgccgagggctactccatgacgggggtgtcggtcaccgccaca
gtcaccggggccaacgctggagcgttgatggccgaggcagcaacgaatggtgaggggaat
gcacgggtttgctacaccggcagcagcgcgggcactgacaccatcgccgtgagggcggga
gacgtcgccggcgaagccaccgtcgaatggcgcgacctcctgcccagcgctcaactcagc
gtcacggtcacgccgaccagcgtcgccgagccgggcggaccggtgacctggacggtgcgc
gtcaccaacggttccgaggagacagcgacgatgacggcgctctccgacccggctggctcg
ctccaggggaggggcacctgtgaggtgccccaacaggtcgaaggcttcgcgtcctacacc
tgcacgttcagcgaggagatctccggcactggaggacagtcgtactcccggagcttcgct
gtgaagctggctgacgacgacggcaaccactcaaccgatgagttcaccgcgaaggtggag
atcctggccgtcgagcagccggagccgcccgtggcgaccatcacccaggcccccgatgca
gtaaccagcagccggacggccacgttcgccttcactgcggaccagcccggggcaaccttt
gagtgcgcgctagacgacggcccactcacggcctgcgtcacgcccgtcagctatcacaac
ctcggagacggggaccaccgcttcgtcgttcgggcaatcggacaggccggtgcggggcgc
gtggcggagcacacgtggacgatcgaagcgcggaccccgccgccgagggatctgtacgag
acgcccggctatcacgactccgggggacggcaatggttcacgcgctgcgagccgtactcg
cagacgacgcggtgttggacctacatctgggccacgacgatcgaacgggtcgggaaccac
tacgtcacgagcaacggctgggtgttcaacaacctgacctacgtggcttcgcccaagcgt
ctatgggtcggcaacccgctcgcgatcactggctcctggactgacacggatgggcgtcgt
tggaggacggaatgcaacactccgacgtctgggggtaacggctgccgctcctacgtgacg
acgaaggtgctggaagccacgcccacagggccgaggtttgtgctgagggagaggttcaac
aacatcgtccgcttcagttga
DBGET
integrated database retrieval system