Tepidiforma flava: O0235_12080
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Entry
O0235_12080 CDS
T08993
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
tfla
Tepidiforma flava
Brite
KEGG Orthology (KO) [BR:
tfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfla03009
]
O0235_12080
Enzymes [BR:
tfla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
O0235_12080
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
O0235_12080
Ribosome biogenesis [BR:
tfla03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
O0235_12080
23S rRNA modification factors
O0235_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
SYY_C-terminal
Methyltrans_SAM
Motif
Other DBs
NCBI-ProteinID:
WBL35508
LinkDB
All DBs
Position
2188310..2189047
Genome browser
AA seq
245 aa
AA seq
DB search
MARVRADLLLVQRGLAESREQARQLIMAGQVRSGTRTLVKPAEPLDPAAPLEVLEPLRYV
SRGGLKLEAALREFCIDPAGRVCLDLGASTGGFTDCLLQHGAARVIAVDVGRGQLHQRLR
GDPRVELLEGVNARSLPPLPPADLVVADLSFISLEKVLPAAAARVPPRTPVIALLKPQFE
AGPADVPAGGVIRDPAVLERVRARFLAWAAAHGWETCGIIPSPIRGGDGNTEYLVCLRTP
PAGDA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtccgcgccgacctgcttctcgtccagcggggcctcgccgaatcccgcgaa
caggcccgccagctcatcatggccgggcaggtccgctccggcacgcggaccctcgtcaag
ccggccgagccgctggacccggccgcgcccctcgaggttctcgaacccctccgctacgtg
agccgcggcggcctcaagctcgaagccgccctccgcgagttctgcatcgaccccgcaggg
cgcgtctgcctcgacctcggggcttcgaccggcggcttcaccgattgcctcctccagcac
ggcgccgcccgcgtcatcgccgtcgacgtcggccgcggccagctccaccagcgcctccgc
ggcgacccccgcgtcgagctgctcgaaggtgtcaacgcgcgcagcctcccgccgctgccg
cccgcggacctcgtcgttgccgacctctccttcatctccctcgaaaaggtgctccccgcc
gccgctgcccgcgtgcccccgcgcacgccggtcatcgcgctcctcaaaccccagttcgaa
gccgggccggccgacgtcccggctggcggcgtcatccgcgacccggccgtcctcgaacgc
gtccgcgcgcgcttcctcgcgtgggccgctgctcacggctgggaaacctgtggcatcatt
ccttcgcccatccgcgggggcgacggcaacactgagtacctcgtctgcctgcgcaccccg
cccgccggagacgcctga
DBGET
integrated database retrieval system
