Tepidiforma flava: O0235_13495
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Entry
O0235_13495 CDS
T08993
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tfla
Tepidiforma flava
Pathway
tfla03030
DNA replication
tfla03430
Mismatch repair
tfla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O0235_13495
03430 Mismatch repair
O0235_13495
03440 Homologous recombination
O0235_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfla03032
]
O0235_13495
03400 DNA repair and recombination proteins [BR:
tfla03400
]
O0235_13495
Enzymes [BR:
tfla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O0235_13495
DNA replication proteins [BR:
tfla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O0235_13495
DNA repair and recombination proteins [BR:
tfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O0235_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
RNase_T
DEAD
DNA_pol_A_exo1
DEDDh_C
ResIII
DEAD_2
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WBL35770
LinkDB
All DBs
Position
2460583..2463318
Genome browser
AA seq
911 aa
AA seq
DB search
MTAYIALDLETTGLDPARDRIIEVGAIRFTEAGEEAEFSSLVNPGRRLSPFIERLTGITS
QDVAGAPPLERIAEELRRFVAGHTIVGHNIEFDLEFLRAAGVDSIADAIDTATLARLLLP
ELKNHGLADVAEALGLELDGRHRALSDARLAARVFTGLLRLARAVEPSRRAVLAGLVAED
SPSLARVLSADAEPVPPKPSILPVPPPFHAPPPLAPRNPPVRIGRGDVEAVFRALAGGLP
GFEQREEQMAMAEAVRRAFDHGGHLMVEAGTGVGKSLAYLVPAALDAVRNGRRAVVSTNT
IALQEQLLQKDIPVLREALVRAGVIRREEDFRVSLLKGRGNYLCYARWLASYVSGARDPD
VARLSANILLWIEQTRTGDRAELRLGPEDWTTWARLSAADADCLSRQHRHVREGNCFLWR
ARKTAESAHLLIVNHALLLADIASGGSAIPSFDHLIVDEAHNLEDVATQQFGGALTARAL
GEALDGIHRPGTREHREGGAVLLLRSFEGEPYAGAARALLGLAGAAREAARPFFEAVGSL
PGRDGEGERMLLSSIARREPAWERVEALWEALAAQLDRVERAGEEAGRLLGNAPVEAASE
LAGEFLAPFRRLADLRRLGEQIVNPSGAEMITWAERTRDGLGSLHMAPIDVGPILWEQVF
EPRRAVVATSATLSANHDMSFAAQRLGLRDPETLELGSPFDYERAALLAAVDDLPEPNHP
DFPTRLAAAIGQLALASRGRAMALFTSNALLRQVSDLVRPLVEPAGIVVLAQGIDGTPRW
ITEQLRENHETLVLGSASFWEGVDIRGEALSLVMITRLPFDVPTDPVARARAEQYDDPFN
QYQVPAAILRFRQGFGRLIRDRRDRGVVAVFDRRLWEKRYGRQFIDSLPPCTRFKGSTRE
VAAAIEEWLDR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctacattgcgctcgacctcgaaacgaccggcctggacccggcacgcgaccgg
atcatcgaggttggcgccatccgcttcacggaggccggcgaggaggcggagttctcgagc
ctcgtgaacccgggccggcggctgtcgccgttcatcgagcggctcaccgggatcaccagc
caggatgtcgcgggggcgccgccgctcgagcgcatcgccgaggagctgcggcggttcgtc
gcggggcacaccatcgtcgggcacaacatcgaattcgacctcgaattcctgcgcgccgcc
ggggtggacagcatcgccgacgcgatcgataccgctacgcttgcccgcctgctgctgcct
gagctgaagaatcacggcctcgccgatgtcgcggaggcgctgggcctggagctggacggc
cgccaccgtgcgctttcggatgcgcggctggctgcgcgggtgttcaccgggctgctccgc
ctggcgcgcgccgtcgaaccgtcgaggagagccgtgctggcgggcctggtcgcggaggac
tcgccatcgctggcgcgggtgctctcggcggacgcggagccggtgccgccgaaaccgtcc
atcctcccggtgccgccgccgttccatgctccgccgccgctggcgccgcggaatcccccg
gtgcgcatcgggcgaggcgacgtcgaagccgtgttccgcgcgctcgcgggtgggctgccg
ggcttcgagcagcgcgaggagcagatggcgatggccgaggccgtgcgccgggctttcgac
cacggcggccacctgatggtcgaggccggcaccggcgtcggcaagtcgctcgcctacctg
gtgcctgccgcgctcgatgcggtgcgcaacgggcggcgggcggtggtcagcacgaacacc
atcgcgctgcaggagcagctgctccagaaagacatcccggtgctccgggaggcgctcgtc
cgggccggggtcatccggcgggaggaagacttccgggtctcgctgttgaagggtcgcggc
aactacctgtgttatgcgcggtggctggcgagctacgtctccggcgcccgcgacccggat
gtggcgcggctgagcgcgaacatcctgctctggatcgagcagacccggaccggcgaccgg
gctgaactccggctggggccggaggactggacgacctgggcgcgcctctcggcggccgat
gcggattgcctgtcgcgccagcaccgccacgtccgcgaaggcaactgcttcctctggcgg
gcccggaagacggccgaatctgcgcacctgctgatcgtgaaccacgccctcctgctggcc
gatatcgcctcgggcggcagcgccatcccatcgttcgaccacctcatcgtcgacgaggcg
cacaacctggaggacgtcgcgacgcagcagttcggcggggcgctcacggcgcgggcgctc
ggcgaagcgctcgacggcatccaccggccggggacgcgcgagcaccgggagggcggcgcg
gtgctgctcctgcgctcgttcgagggagagccgtacgccggcgcggcgcgcgccctgctg
gggcttgccggcgccgcgcgcgaggcggcgcggccgttcttcgaggcggtcgggtcgctg
cccggccgggatggcgagggcgagcgcatgctgctcagttccatcgcccggcgggagccg
gcatgggagcgggtcgaagcgctctgggaggcgctggctgcgcagctcgaccgggtggag
cgcgccggggaagaagccgggcgcctgctcggaaacgcgccggtggaagccgcctcggag
ctggcgggcgagttccttgcgccgttccggcggctggccgacctgcgccggctgggcgag
cagatcgtcaacccctcgggcgccgagatgatcacctgggcggagcgcacccgcgacggg
ctcggctcgctccacatggcgcccatcgacgtggggccgatcctctgggagcaggtgttc
gagccgcgccgggcggtggtcgcgaccagcgcgacgctcagcgcgaaccacgacatgtcg
ttcgcagcccagcggctgggcctgcgggaccccgaaacgctcgaactcggatcgccgttc
gactacgaacgggcggcgctgctggcggcggtcgatgacctcccggagccgaaccacccg
gacttcccgacccggctggcggcagccatcggacagctggcgctggcatcccggggccgc
gcgatggcgctcttcacctccaacgcgctcctgcggcaggtctctgacctggtccggccg
ctggtggagccggccggcatcgtggtgctggcgcagggcatcgacggcacaccgcgctgg
attacggagcagctccgggagaatcacgagaccctcgtgctcggcagcgcgagcttctgg
gagggagtggacatccggggcgaggcgctctcgctcgtgatgatcacgcggctgccgttc
gacgtgccgaccgacccggtggcccgggcgcgcgccgagcagtatgacgacccgttcaac
cagtaccaggtgccggcggcgatcctccgcttccggcagggcttcggccggctcatccgc
gaccggcgggaccggggtgtcgtcgccgtgttcgaccgccggctgtgggagaagcggtac
gggcgccagttcatcgattcgcttcccccgtgcacgcgcttcaaaggctcgacgcgcgag
gtggcggcagcgatcgaagaatggctggaccggtga
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