KEGG   Tepidiforma flava: O0235_13605
Entry
O0235_13605       CDS       T08993                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tfla  Tepidiforma flava
Brite
KEGG Orthology (KO) [BR:tfla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfla03400]
    O0235_13605
Enzymes [BR:tfla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     O0235_13605
    5.6.2.6  RNA 3'-5' helicase
     O0235_13605
DNA repair and recombination proteins [BR:tfla03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    O0235_13605
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII AAA_25 DUF6406
Other DBs
NCBI-ProteinID: WBL35789
LinkDB
Position
2482706..2487145
AA seq 1479 aa
MTAPSPAADPLAPFSAPVRSWFTGAFPAPTPAQALGWEAIASGQHTLLLAPTGSGKTLAA
FLWCLDRLVQRPPLPNDRNGKARRPGVAVVYISPLKALSYDIERNLRAPLAGLRIAALRE
GLPEPDITVGVRTGDTPARDREDFRRNPPDILITTPESLYLLLTSKAREALATVETVIVD
EIHTMASTKRGAHLALSLERLERLTGREFQRIGLSATQRPLDEVARYLGGDRPVRVVDAG
SQRPLDLEVIVPLEDMTRPADYAGPVPERELSPEQRSSVWPAFYQEILQLVRAHRSTLVF
VNNRRLAERIAARVNELAGETLLRAHHGSVSREQRFAIEEQLKAGQLPGIVCTSSMELGI
DMGAVDLVVQVESPKSVASGLQRVGRAGHQVDGVSRGRLLPKHRADLLECAVVARRMREG
AIEATRVPRNPLDVLAQQIVAACAVEEMTADELLSMARRSYPFATLSREQLEGVLGMLAG
RYPSDEFAELRPRVTWDPETGAVSTRRDAKTLAIINAGTIPDRGLYGVYLGEDGPRVGEL
DEEMVYESRPGETFLLGATTWRIERITRDRVIVSPAPGQPGKMPFWRGDGVGRSAELGEA
VGALVRGLERRREDEAAAWLERETDLDRRAARNLAAYLAEEREATGWLPTDRRIVVERYL
DELGDWRIVLLSPYGGRVHAPWAMAIEARLAAAGFGEAQVIWGDDGIAIRAGGAEEPPPS
DLLFPPADEVEDLVIERLGGTALFAGRFRENAGRALLLPRRRPGARAPLWLQRQRAADLL
AVASKYGSFPIVLETYRECLQDVFDLPALGRLLRAVETGDVEVREAAVRDASPFARSLAL
EYVAAFMYEGDLPLAERKAQALSLDRALLRDLLGEADLRELLDPAAVEAVELELQGLTGV
RKPADADGLHDLLRRLGDLTVDEVAARIADPGRASALLRQLAASGRACPVRIGGEERWIP
AEDAVRYRDAVGAVIPQGVPGAFAPAAPGALASLLLRYARTRAPFATVEPAGRWRLPPAI
VADALAALEAEGRMVRGEFRPGGSGEEWCHPEVLRLVKRRSIARHRREVEPVDGAAFARF
LPAWHGIPGKHVGLDGLRDAIARLEGYPLPASMLERAILPARVEGYTPAMLDALCAAGEV
AWFGAGRIRDDDGRIVLAARERLEAFVAGGPPPGDGTARAIFDLLQARGAQFFADIASAV
GSPVREVLDALWELAWAGLVTNDTYAPVRAWLGRGGDRRPAPGGRLHRLPPESGGRWALL
PPAAERTRSLHAWAGALLERRGVVTREAANAEALRGGFSALYPVFGEMEERGRARRGYFV
EGLGGAQFALAGAVERLRAERSPAERPRGVLLAAVDPAQPYGEVLPWPGTGEGAARRAPA
RAAGSFVILVEGVPVLFLERWGKSLAVLVAASDDADGAMEAALDALAAAAPALAPRGLTI
ERIDGGPASASPLAARLTARGFAAGYRGLVYRPGARRDA
NT seq 4440 nt   +upstreamnt  +downstreamnt
atgactgcgccatccccggccgcagacccgctcgcaccgttcagcgcgccggttcggtcg
tggttcaccggcgcctttcccgcgccgacgccggcgcaggcgctggggtgggaggcgatc
gcctccggtcagcacacgctgctgctcgctccgacggggtccgggaaaacgctcgcagcc
ttcctctggtgcctcgaccggctggtccagcggccgccgctcccgaacgacaggaacggc
aaggcgcggcggccgggcgtcgccgtggtctatatttcgccgctgaaggcgctctcgtac
gacatcgagcgcaacctgcgcgcgccgctcgccgggctccggattgcggcgctgcgcgaa
gggctgcccgagcctgacatcacggtcggcgtccggacgggggacaccccagcgcgcgac
cgcgaagatttccggcgcaacccgcccgacatcctcatcacgacgccggagtcgctctac
ctgctgctgacgtcgaaggcccgggaggccctcgcgacggtggagaccgtcatcgtcgac
gaaatccacacgatggcatcgaccaagcgcggggcgcatctcgcgctctcgctcgagcgg
ctggagcggctgaccggccgggaattccagcgcatcggcctctcggccacccagcggccg
ctggatgaagtggcgcgctatctcggcggcgaccggccggtgcgggtggtcgatgccggt
tcgcaacgcccgctcgacctcgaggtcatcgttccgctggaggacatgacccggccagcc
gactacgcgggcccggtcccggagcgtgagctcagccccgagcagcgcagttccgtttgg
cccgccttctaccaggagattctccagctggtccgcgcgcaccggtcgacgctggtgttc
gtgaacaaccggcggctcgccgagcgcatcgcagcgcgggtgaacgaactcgcaggcgaa
acgctgctcagggcccaccacggctcggtctcgcgggagcagcggttcgccatcgaggag
cagctgaaggctggccagctcccggggatcgtctgcacgagctcgatggagctcggcatc
gatatgggcgcggtcgacctcgtggtgcaggtcgagtcgccgaagagcgttgcgagcggt
ctccagcgggtcggccgggccggccaccaggtcgacggcgtgagccggggccggctgctg
ccgaagcaccgcgccgacttgctcgagtgcgcggtcgtggcgcgccggatgcgcgagggc
gcgatcgaggcgacgcgcgttccgcggaacccgctcgacgtgctcgcccagcagatcgtc
gcagcctgtgcggtcgaggagatgaccgccgacgagctcctgtcgatggcccggaggagc
taccccttcgcgactttgagccgcgaacagctcgagggcgtgctgggcatgctcgccggc
cgctacccctcggacgagtttgcggagcttcggccgcgggtgacctgggacccggagacg
ggtgccgtgagcacccgccgcgacgcgaagacgctcgcgatcatcaatgcgggcacgatc
ccggaccggggcctgtacggcgtgtacctcggcgaggacgggccgcgggtcggcgagctg
gacgaggagatggtgtacgaaagccggccgggtgagaccttcctgctcggcgcgacgacc
tggcgcatcgaacgcatcacccgcgaccgcgtcatcgtctcgccggcgccgggccagccg
gggaagatgccgttctggcggggcgacggcgtcggccggtcggcggaactcggggaggcg
gtcggcgcgctggtgcgcggcctcgagcgccgccgcgaggacgaggccgcggcgtggctg
gagcgtgagaccgacctcgaccgccgggccgcgcggaacctcgctgcctacctcgcggaa
gagcgggaggccacgggctggctccccaccgaccggcggatcgtggtggagcggtatctc
gacgaactgggcgactggcgcatcgtgctcctctcgccgtacggcggccgcgtccacgcc
ccgtgggcgatggcgatcgaggcccgcctggcggcggccgggttcggggaagcgcaggtc
atctggggtgacgacggcatcgccatccgcgctggcggggcagaggagccgcccccgtcg
gaccttctcttcccgcccgcggacgaggtcgaagacctcgtcatcgagcggctcggcggc
acggcgctgttcgccggccggttccgcgagaacgctggccgggccctcctgctgccccgg
cggcgtcccggcgcgcgggcgccgctctggctccagcggcagcgggccgcggacctgctg
gccgtggcgagcaagtacggttcctttccgatcgtcctcgagacctaccgtgagtgcctg
caggacgtgttcgacctgccggcgctcgggcggctcctgcgggcggtcgaaaccggggac
gtggaggtccgcgaggcggccgttcgcgatgcgtcgccgttcgcccgctcgctcgcgctc
gagtacgtggccgccttcatgtacgagggcgacctcccgctcgccgagcggaaggcacag
gcgctttcgctcgaccgggcgctcctgcgcgatctgctgggcgaagcggacttgcgggag
ctgctcgaccccgcggcggtcgaggccgtcgaactggagcttcaagggctcacgggggtc
cgaaagccggccgatgccgacggcctgcacgacctgctccggcggctcggcgacctcacg
gtcgatgaggttgcggcccgcatcgccgacccggggcgggcaagcgcgctgctccggcag
ctggcggcgagcggccgcgcctgccccgtccgcatcggcggcgaagagcgctggatccct
gcggaggatgccgtgcgctaccgcgatgccgtcggtgcggttattccgcagggcgtcccc
ggcgcgttcgccccggccgcgccgggtgcgctggcctcgctgctccttcggtatgcgcgc
acgcgcgcgccgttcgcgacggtcgagcccgccgggcggtggcggctgccgccggccatc
gtggccgacgcgctcgccgcgctggaagccgagggccggatggtccggggcgagtttcgc
cccggcgggagcggcgaagagtggtgccacccggaggtgctccgcctggtcaagcggcgc
tcgattgcgcggcaccgccgcgaggtcgagccggtcgatggggcggcgttcgcccgcttc
ctcccggcctggcacggcatcccgggcaagcacgtcgggctggacggcctccgcgacgct
atcgcccggctggagggctacccgctccccgcctcgatgctggagcgcgccatcctgcct
gcccgggtcgaggggtacacgcccgcgatgctggatgccctgtgcgcggccggcgaggtc
gcgtggttcggagccgggcgcatccgggacgacgacgggcgcatcgtgctcgccgcgcgg
gagcggctggaggcattcgtggcgggtggaccgccgcccggcgacggcaccgcgcgggcc
atcttcgacctcctgcaggcgcgcggcgcccagttcttcgcggacatcgcctcggcggtc
ggctcgcccgtccgggaggtgctcgatgccctgtgggagctcgcctgggcgggcctcgtc
acgaacgacacctacgcgccggtccgcgcctggctcgggcgcggcggagaccgccggccg
gcaccggggggacggctgcaccgccttccgccggagtcgggcgggcgctgggcgctcctc
ccgccggccgccgaacgaacgcggtcgctgcacgcgtgggccggggcgctgctcgaacgg
cggggcgtcgtcacgcgcgaggcggcgaacgcggaggcgctgcgcggcggcttctcggcc
ctctacccggtcttcggcgagatggaggagcggggccgggcgcggcgcggctacttcgtc
gaagggctcggcggcgcccagttcgcgctcgccggcgctgtcgaacggctccgcgccgag
cgctccccggccgaacgcccccgcggtgttctcctcgcagccgtcgaccctgcgcagccg
tacggcgaggtgctgccgtggccgggcaccggcgaaggcgcggcccggcgcgcaccggcg
cgcgcggccggcagtttcgtcatcctcgtcgagggggtcccggtgctgttcctcgagcgc
tggggcaaatcgctcgccgtcctcgtggcggcgtccgacgatgctgacggtgcgatggaa
gcagccctcgatgcgctggcggccgcggcgcccgccctcgcgccccgggggctcaccatc
gagcgcatcgacggggggccggcctccgcatcgccgctggccgcgcggctgacggcgcgg
ggcttcgccgcgggctaccgcggcctcgtgtaccgcccgggggcgcgccgcgatgcctga

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