KEGG   Tepidiforma flava: O0235_14580
Entry
O0235_14580       CDS       T08993                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
tfla  Tepidiforma flava
Pathway
tfla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tfla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O0235_14580 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfla03019]
    O0235_14580 (rny)
Messenger RNA biogenesis [BR:tfla03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     O0235_14580 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_2 KH_KhpA-B KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: WBL35972
LinkDB
Position
2684701..2686230
AA seq 509 aa
MLAITAIIVGLVGLLVGAGAGVMYRRRVTGTSLQQAEEQASRILAEAETRQKELLLQAKE
ETLALRNSLEAEMKERRAEISRIEQRLAQKEENLDRKLETLERREQALRDREAQIEQLRA
EAEELRQRQATELERVANLSVEEARQQLLAAVEVEIREEASRRVREMEKEVEATAAQRAR
KILATAIQRYTSEVTAETTVSVVPIPSDDMKGRIIGREGRNIRAIEAATGVDLIIDDTPD
AVTVSAFDPVRREIARQALTMLVQDGRIHPTRIEEAVNRARRDVEATMMEAAEAAAVEAG
VLNLHPEVLKIFGRLKYRTSYGQNVMRHSVETAHIAAMIAQEIGADVEVARAGGFLHDLG
KAVDHEVEGTHALIGADIARRYKVKEAIAHCIEAHHEEVEPRTVEAIIVMMADAISGGRP
GARRESLEAYIKRLETLENIAKSYKGVESAFAIQAGREVRVIVKPELVDDLEAMRIARDV
SQKIEETMEYPGQIKVTVVRETRATEYAR
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgctggcgataactgcgattatcgtcggcctcgtggggttgctggttggtgcgggggcg
ggcgtcatgtaccgccgccgcgttaccgggacatcgctgcaacaagcggaggaacaggcc
agccggatcctcgctgaggccgagacacgacagaaggagctcctgctccaggcaaaagaa
gagacgctcgcgctccggaattcgctcgaagcggagatgaaggagcggcgggcggagatt
tcgcgcatcgagcagcggctcgcgcagaaggaagagaacctcgaccggaagctcgagacg
ctggaacggcgggagcaggccctgcgcgaccgcgaggcgcagatcgaacagctgcgggcc
gaagcggaggagctgcggcagcggcaggcgaccgagctcgagcgcgtggcgaatctctcg
gtcgaggaagcgcggcagcagctgctcgccgccgtcgaggtcgaaatccgcgaagaagcg
tcccgccgcgtgcgggagatggagaaggaagtcgaggcgacggccgcgcagcgcgcccgg
aagatcctcgcgacggccatccagcggtacacctccgaagtcacggctgagacgaccgtt
tcggtggtgccgatcccgagcgatgacatgaagggccgaatcatcggccgcgagggccgg
aacatccgggcgatcgaggcagcgaccggggtggacctgatcatcgacgacacgccggac
gccgtgacggtgagcgcgttcgacccggtgcggcgggagattgcgcggcaggcgctgacg
atgctcgtgcaggacgggcgcatccacccgacccgcatcgaggaagcggtgaaccgcgcg
cgccgcgacgtcgaggcgacgatgatggaggccgcggaggctgccgcggtcgaggcgggc
gtgctgaacctccacccggaagtgctgaagattttcggccggctgaagtaccgcacgagc
tacggccagaacgtgatgcgccactcggtggaaacggcccacatcgcggcgatgattgcg
caggagatcggcgccgacgtagaggtcgcgcgggccgggggcttcctgcacgacctgggc
aaagcggtcgaccacgaggtggagggaacacacgccctgatcggggccgacatcgcgcgc
cgctacaaggtcaaagaggccatcgcccactgcatcgaggcgcaccacgaagaagtcgaa
ccgcgcacggtggaggccatcatcgtgatgatggcggacgcgatttcgggcggccggccg
ggcgcgcggcgggagtcgctcgaggcctacatcaagcggctggagacgctcgagaacatc
gccaagagctacaagggcgtggaatcggcgttcgccatccaggccgggcgggaagtgcgc
gtcatcgtcaagccggagctagtggacgacctcgaggcgatgcggattgcccgcgatgtg
agccagaagatcgaggagacgatggagtacccgggccagatcaaggtcacggtggtccgg
gagacgcgcgcgaccgagtacgcccggtag

DBGET integrated database retrieval system