Tepidiforma flava: O0235_14580
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Entry
O0235_14580 CDS
T08993
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tfla
Tepidiforma flava
Pathway
tfla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O0235_14580 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfla03019
]
O0235_14580 (rny)
Messenger RNA biogenesis [BR:
tfla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O0235_14580 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WBL35972
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Position
2684701..2686230
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AA seq
509 aa
AA seq
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MLAITAIIVGLVGLLVGAGAGVMYRRRVTGTSLQQAEEQASRILAEAETRQKELLLQAKE
ETLALRNSLEAEMKERRAEISRIEQRLAQKEENLDRKLETLERREQALRDREAQIEQLRA
EAEELRQRQATELERVANLSVEEARQQLLAAVEVEIREEASRRVREMEKEVEATAAQRAR
KILATAIQRYTSEVTAETTVSVVPIPSDDMKGRIIGREGRNIRAIEAATGVDLIIDDTPD
AVTVSAFDPVRREIARQALTMLVQDGRIHPTRIEEAVNRARRDVEATMMEAAEAAAVEAG
VLNLHPEVLKIFGRLKYRTSYGQNVMRHSVETAHIAAMIAQEIGADVEVARAGGFLHDLG
KAVDHEVEGTHALIGADIARRYKVKEAIAHCIEAHHEEVEPRTVEAIIVMMADAISGGRP
GARRESLEAYIKRLETLENIAKSYKGVESAFAIQAGREVRVIVKPELVDDLEAMRIARDV
SQKIEETMEYPGQIKVTVVRETRATEYAR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgataactgcgattatcgtcggcctcgtggggttgctggttggtgcgggggcg
ggcgtcatgtaccgccgccgcgttaccgggacatcgctgcaacaagcggaggaacaggcc
agccggatcctcgctgaggccgagacacgacagaaggagctcctgctccaggcaaaagaa
gagacgctcgcgctccggaattcgctcgaagcggagatgaaggagcggcgggcggagatt
tcgcgcatcgagcagcggctcgcgcagaaggaagagaacctcgaccggaagctcgagacg
ctggaacggcgggagcaggccctgcgcgaccgcgaggcgcagatcgaacagctgcgggcc
gaagcggaggagctgcggcagcggcaggcgaccgagctcgagcgcgtggcgaatctctcg
gtcgaggaagcgcggcagcagctgctcgccgccgtcgaggtcgaaatccgcgaagaagcg
tcccgccgcgtgcgggagatggagaaggaagtcgaggcgacggccgcgcagcgcgcccgg
aagatcctcgcgacggccatccagcggtacacctccgaagtcacggctgagacgaccgtt
tcggtggtgccgatcccgagcgatgacatgaagggccgaatcatcggccgcgagggccgg
aacatccgggcgatcgaggcagcgaccggggtggacctgatcatcgacgacacgccggac
gccgtgacggtgagcgcgttcgacccggtgcggcgggagattgcgcggcaggcgctgacg
atgctcgtgcaggacgggcgcatccacccgacccgcatcgaggaagcggtgaaccgcgcg
cgccgcgacgtcgaggcgacgatgatggaggccgcggaggctgccgcggtcgaggcgggc
gtgctgaacctccacccggaagtgctgaagattttcggccggctgaagtaccgcacgagc
tacggccagaacgtgatgcgccactcggtggaaacggcccacatcgcggcgatgattgcg
caggagatcggcgccgacgtagaggtcgcgcgggccgggggcttcctgcacgacctgggc
aaagcggtcgaccacgaggtggagggaacacacgccctgatcggggccgacatcgcgcgc
cgctacaaggtcaaagaggccatcgcccactgcatcgaggcgcaccacgaagaagtcgaa
ccgcgcacggtggaggccatcatcgtgatgatggcggacgcgatttcgggcggccggccg
ggcgcgcggcgggagtcgctcgaggcctacatcaagcggctggagacgctcgagaacatc
gccaagagctacaagggcgtggaatcggcgttcgccatccaggccgggcgggaagtgcgc
gtcatcgtcaagccggagctagtggacgacctcgaggcgatgcggattgcccgcgatgtg
agccagaagatcgaggagacgatggagtacccgggccagatcaaggtcacggtggtccgg
gagacgcgcgcgaccgagtacgcccggtag
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