Trachypithecus francoisi (Francois's langur): 117067516
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Entry
117067516 CDS
T07225
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117067516 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfn03400
]
117067516 (LIG3)
Enzymes [BR:
tfn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
117067516 (LIG3)
DNA repair and recombination proteins [BR:
tfn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
117067516 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
117067516
NCBI-ProteinID:
XP_033040069
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MSLAFIKILFPQTLRALSRKELCLFREHHRPDVRQFSQWSETDLLHGHPFFLRRKPVLSF
QGSHLRSRATCLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGICRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEALTELEGWEELEDNEKEQITQ
HIADLSSKAASTPKKKAVVQAKLTTTGQVTSPVKSASFVTSNNPRKFSGFSAAKANNSGG
APSSPIPKRSLSSSKCDPKHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDG
FHGDVYLTVKLLLPGVVKTVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFF
EQSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQVLQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMITRVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
GSQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKK
AAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADF
TVVAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNSNSKGGNMLTAK
PSAVKVGERLAMKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRY
FVAFDGDLVQEFDMTSATHVLDSRNKNPAAQQVSPEWIWACIRKRRLVAPC
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggctttcatcaagatcctctttccacaaaccctccgtgcactcagccgaaaa
gaactgtgcctattccgagaacatcacaggccagatgtaagacaattcagccagtggtca
gaaacagatctgcttcatggacaccccttcttcctgagaagaaagcctgttctgtcattc
cagggaagccatctaaggtcacgtgccacctgccttgttttcttgccagggttgcatgtg
ggactctgcagtggcccctgtgagatggctgagcaacggttctgtgtggactatgccaag
cgtggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggcatatgccgaatt
ggcaaagtggtgcccaatcccttctcagagtctgggggtgatatgaaagagtggtaccac
attaaatgcatgtttgagaaactagagcgggcccgggccaccacaaaaaaaatcgaggcc
ctcacagagctggaaggctgggaagagctggaagataatgagaaggaacagataacccag
cacattgcagatctgtcttctaaggcagcaagtacaccaaagaagaaagctgttgtccag
gctaagttgacaaccactggccaggtgacttctccagtgaaaagcgcctcatttgtcacc
agtaacaatccccggaaattttctggcttttcagcagccaaggccaacaactctggggga
gccccctcaagccccatccctaagagaagtctgtcttcaagcaaatgtgaccccaagcat
aaggactgtctgctacgggagtttcgaaagttatgcgccatggtggccgataatcctagc
tacaacacaaagacccagatcatccaggacttcctgcggaaaggctcagcaggagatggt
ttccacggtgatgtgtacctaacggtgaagctgctgctgccaggagtcgttaagactgtt
tacaacttgaatgataagcagattgtgaagcttttcagtcgcatttttaactgcaaccca
gatgatatggcacgggacctagagcagggtgacgtgtcagagacaatcagagtcttcttt
gagcagagcaagtctttccccccagctgccaagagcctccttaccatccaggaggtggat
gaattccttctgcggctgtccaagctcaccaaggaggatgagcagcaacaggtcctgcag
gacattgcctccaggtgtacagccaatgaccttaaatgcatcatcaggttgatcaaacat
gatctgaagatgaactcaggtgcaaaacatgtgttagacgcccttgaccccaatgcctat
gaagccttcaaagcctcgcgcaacctgcaggatgtggtggagcgggtccttcacaatgcg
caggaggtggagaaggagccgggccagagacgagctctgagcgtccaggcctcgctgatg
acacctgtgcagcccatgctggcggaggcctgcaagtccattgaatacgcaatgaagaaa
tgtcccaatggcatgttctctgagatcaagtacgatggagagcgagtccaagtgcataag
aatggagaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggta
gcccactttaaggactacatcccccaggcttttcctgggggacacagcatgatcttggat
tctgaggtgcttctgattgacaacaagacaggcaaaccactgccctttgggactctggga
gtgcacaagaaagcagccttccaggatgctaatgtctgcctgtttgtttttgattgtatc
tactttaatgatgtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcat
gacaacatggttgaaattccaaaccggatcatgttctcagaaatgaagcgagtcacaaaa
gcttcggacttggctgacatgataacccgggtgatccgggagggattggaagggctggtg
ctgaaggatgtgaagggtacatatgagcctgggaagcggcactggctgaaagtgaagaaa
gactatttgaacgagggggccatggccgacacagctgacctggtggtccttggggccttc
tatgggcaagggagcaaaggcggcatgatgtcaatcttcctcatgggctgctacgaccct
ggcagccagaagtggtgcacagtcaccaagtgtgcaggaggccatgatgacgccacgctt
gcccgcctgcagaaggaactagacatggtgaagatcagcaaggaccccagcaaaataccc
agctggctgaaagtcaacaagatctactatcctgacttcatcgtcccagacccaaagaaa
gctgccgtgtgggagatcacaggggctgaattctccaaatcggaggctcacacagctgat
gggatctccatccgattccctcgctgcacccgaatccgagatgataaggactggaaatct
gccactaaccttccccaactcaaggaactgtaccagttgtccaaggagaaggcagacttc
actgtagtggctggagatgaggggagctccactacagggggtagcagtgaagagaataag
ggtccctcagggtctgctgtgtcccgcaaggcccccagcaagccctctgccagtaccaag
aaagcagaagggaagctgagtaactccaacagcaaaggcggcaacatgctgactgcaaag
ccttctgctgtgaaggtgggagagaggctggccatgaagtcttctccagtgaaagtaggg
gagaagcggaaagctgctgatgagaccctgtgccaaacaaaggtactgctggacatcttc
actggagtgcggctttacttgccaccctccacaccagacttcagccgtctcagacgctac
tttgtggcattcgacggggacctggtacaggaatttgatatgacctcagccacgcatgtg
ctggatagcaggaacaagaaccctgcggcccagcaggtctccccagagtggatttgggca
tgtatccggaaacggagactggtagctccctgctag
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