Trachypithecus francoisi (Francois's langur): 117070737
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Entry
117070737 CDS
T07225
Symbol
SPG11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn05014
Amyotrophic lateral sclerosis
tfn05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117070737 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
117070737 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfn03400
]
117070737 (SPG11)
DNA repair and recombination proteins [BR:
tfn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117070737 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
117070737
NCBI-ProteinID:
XP_033046158
LinkDB
All DBs
Position
Unknown
AA seq
2487 aa
AA seq
DB search
MEPTGDSREVSAGVTRPSVSRSVHRACPRHNQVPAKVPGSNGRAKMAAEEGAASAASVGG
SWGAAAMGRVLPMLLVPVPAEAIGQLGSRAQLHTQQEALGSLTAAGSLQVLSLAPGSRGR
GRCCLEGPFWHFIWEDSRNSSTPTDKPKLLALGENYELLIYEFNLKDGRCDATILYSYSG
EALQKLIEDQDISISLLSLRILSFHNNTSLLFINKCIILHIMFPERDAAIRVLNCFTLPL
PAQAVDMIIDTQLCRGILFVLSSLGWIYIFDVVDGTYVAHVDLALHEEDMCNEQQQEPAK
ISSFTSLKVSQDLDVVVIVSSSNSAIALNLNLYFRQHPGHLLCERTLEDLPIQGPKGIDE
DDPVNSAYNMKLTKFSFQIDRSWKAQLSSLNETIKNSKLEVSCCAPWFQDILRSESPESG
NHSTGVQSWAFIPQDIMHGQYNFLRKDHTKTSDPGRSWKIMHISEQEEPIDLKCVSVTGF
TALFTWEVERMGYTITLWDLENQGMQCFSFGRKCIPVDSSGEQQLCFVLTEKGLSLILFG
LTQEEFLNRLMIHGSASTVDILCHLNGWGRCSIPIHALEAGIENRQLDTVNFFLKSKENL
FNPSSKSSVSDQFDHFSSHLYLRNVEELMPALDLLCSAIRESYSEPQSKHFSEQLLNLTL
SFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWKLTDAVDEYDAHENVP
TVKESNIWKKLSFEEVIANAILNNRIPEAQTFFRIDSHSAQKLEELIGIGLNLVFDNLKK
NNIKEASELLKNMGFDVKGQLLKICFYTTDKNIRDFLVEILKEKNYFSEKEKRTIDFVHQ
VEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKDEFNKQDHRIVLNWAL
WWDQLTQESIILPRISPEEYKSYSPEALWRYLTARHDWLNIILWIGEFQTQHSYASFQQN
KWPLLTIDVINQNTSCNNYMRNEILDKLARNGIFLASELEDFECFLLRLSRIGGVIQDTL
PVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLSPENCPFLEKKELHEAHPWFE
FLVQCRQVASNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGHTLLALATTMYSPGGV
SQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCIPPSVLPSDITLYHLIQSLSP
FDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAVVERLNFAYYLHHGRPSFAFGTF
LVQELIKSKTPKQLIQQVGNEAYVIGLSSFHIPSVGAACVCFLELLGLDSLKLRVDMKVA
NIILRYKCRNEDAQYSFIRESVAEKLSKLADGEKATTEELLVLLEEGTWNSIQQQEIKRL
SSECSSQWALVVQFCRLHDMKLSISYLRECAKANDWLQFIIHSQLHNYHPPEVKSLIQYF
SPVIQDHLRLAFENLPLVPTSKMDISQVCNKSSQELQGSKEVMTDLFEILLQCSEEPDSW
HWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSVEDSVATEAMGYIQDSIEDHTW
NLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVMEMYELCMFFKNYKEAEAKLLEF
QESLEILNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTPYELGKLLQLFVEREHLFSD
GPDVKKLYVLCQILKDTSIAINHIIITCYSIENFQHECKSILERLQTDGQFALARRVAEL
AELPVDNLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKKNSISSKAASSFFSTQ
AHVACEHPAGWSSIEERHLLLTLAGHWLAQEDVVPLDKLEELEKQIWLCRITQHTLGRNQ
EETEPKFSRQISTSGELSFDSLAREFSFSKLAALNTSKYLELNSLPSKETCENRLDWKEQ
ESLNFLIGRLLDDGCVHEASRVCRYFHFYNRDVALVLHCRALASGEASMEDLHPEIHALL
QSAELLEEEPDIPLRRVHSTSSLDSQKFVTVPSSDEVVTNLEVLTSKCLHGKNYCRQVLC
LYDLAKELGCSYTDVAAQDGEAMLREILASQQPDRCKRAQAFISTQGLKPDTVAELVAEE
VTRELLTSSQGTGHKQMFNPTEESQTFLQLTTLCQDHTLVGMKLLDKISSVPHGELSCTT
ELLILAHHCFTLTCHMEGIIRVLQAARMLTDNHLAPSEEYGLVVRLLTGIGRYNEMTYIF
DLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHE
AAARIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYAKDSCVRQAQHCQRLTK
LITLQIHFLNTGQNTMLINLGRHKLMDCILALPRFYQASIVAEAYDFVPDWAEILYQQVI
LKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMVMENLKKLLTYCEDVYLYYKLAY
EHKFYEIVNVLLKDPQTGCCLKDMLAG
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgaccggagacagccgagaggtctccgcgggagtcacaaggccgagcgtgagc
cgctccgtacaccgcgcatgcccacgacacaatcaggttccggcgaaagtgcccggaagt
aacggccgagccaagatggctgcagaggagggggccgcgagtgctgcttccgtcggcggc
agctggggcgccgcggccatggggcgggttctaccgatgctgttggtgccggtccccgcc
gaggcgattgggcagctgggctcccgggcgcagctgcacacacagcaggaggctctgggg
agcctgacggctgcgggcagcctccaggtgctttctttggcgcctggcagccggggccgg
ggtcgctgctgcctggagggccccttctggcactttatatgggaggattctcgtaacagc
agcacaccaactgacaagcccaaactgctcgcgcttggtgaaaattatgaactgcttatc
tatgaatttaatttgaaagatggaagatgtgatgcaaccattttgtatagctatagtggg
gaggcattgcaaaagctcattgaagatcaagatatcagtatttccttattgtctttgaga
atcctgtcatttcacaataacacatcgttattgttcatcaacaaatgtatcatcctacat
attatgtttcctgaaagagatgctgcaattagagtactcaactgtttcacactacccttg
cctgcacaggcagtggacatgattattgacacacagctctgcagaggaattctttttgtt
ttgagtagtttaggctggatctacatttttgatgttgtggatggtacgtatgtagctcat
gtggatttagcacttcacgaagaagatatgtgtaatgagcagcaacaggagccagccaag
atttcttcatttacttcactgaaagtgtctcaagacctcgatgttgtagtgattgtcagc
tcatccaactctgcaattgctcttaacttaaatttgtatttcaggcaacacccaggacac
ctactgtgtgaaagaacactagaagaccttcctattcaaggacctaaggggatagatgaa
gatgatcctgttaactctgcctacaacatgaaactgaccaagttttctttccaaattgat
aggtcgtggaaagcccagctatcatcattgaatgaaacaataaagaactccaaactggag
gtttcctgttgtgctccgtggttccaggatattttgcgttcagagtcacctgaatctggt
aaccacagtacaggtgtacagagctgggctttcattccacaggacataatgcacgggcaa
tataattttctacggaaagatcataccaagaccagtgatccaggaagatcatggaagata
atgcacatcagtgaacaagaggaacccatagatcttaaatgtgtgtctgtgacaggattc
actgcactgtttacttgggaagtggaaaggatgggctataccattaccctctgggatttg
gagaaccagggcatgcagtgtttttcctttggcagaaagtgtattcctgtagacagtagt
ggagagcagcaactatgctttgttttgacagagaaaggactctctctgattttgtttggt
ttgactcaagaagagtttttaaacagactcatgatccatggaagtgccagcactgtggac
attctttgtcatctcaatggctgggggaggtgctccattcccatacatgcactagaggct
gggatagaaaatcgtcagctggacacagtaaatttctttttgaagagcaaggaaaatctt
tttaatccatcctcaaaatcttctgtatctgatcagtttgatcacttttcatcccattta
tatttaagaaatgtggaagagctgatgccagcattggatttactttgctcagcaattaga
gaaagttattctgaaccccaaagcaaacatttttcagaacaattgcttaatcttacactg
tctttccttaacaaccaaataaaggagctttttattcacactgaagaactagatgaacat
ctgcaaaaaggagtgaacattttgactagctacattaatgaacttcgaaccttcatgata
aagtttccttggaagctaacagatgctgtagatgaatatgatgcacatgaaaatgtcccc
acagtaaaggagagcaatatatggaagaaactcagctttgaggaagttattgccaatgcc
attttaaacaacagaataccagaggcacagactttcttcaggattgatagtcattctgct
caaaaacttgaggagctgattggcataggcctaaatttggtctttgacaatttaaaaaag
aacaatataaaggaagcctctgaacttttgaagaatatgggttttgatgtaaaaggccaa
ttgctcaagatatgcttctacacaactgataaaaatatacgcgactttttggttgaaatt
ttaaaagaaaaaaattatttttctgaaaaagagaaaagaactatagacttcgtgcatcaa
gttgagaagctttatttgggacatttccaagaaaatatgcaaatccagtcatttcccagg
tattggataaaagaacaagattttttcaagcacaagtctgttttggactcattcctgaaa
tatgattgtaaagatgaatttaacaaacaggaccatagaattgtgttaaattgggctctg
tggtgggatcaactaacacaagaatccatcattctccccaggataagtccagaagaatac
aaatcatattcccctgaagccctctggagatacctcacagctcgccatgattggttaaac
attatcttatggattggagaatttcaaacccagcatagttatgcttcatttcagcagaac
aaatggccccttctgactattgatgttattaaccagaatacttcctgtaacaactacatg
aggaatgaaattttagataagctggccaggaatgggatttttctggcatctgaactggaa
gactttgaatgcttcctcctaagactgagccgtattggaggtgtaatacaggataccctc
cctgttcaaaactacaagaccaaagaaggttgggatttccattctcaattcattctctat
tgtttggagcacagtctgcagcatcttctttatgtctaccttgactgttacaaacttagt
cctgaaaattgtccctttttggaaaaaaaagagttacatgaagcacatccttggtttgaa
tttttagttcagtgtcgacaagttgccagtaatttaacagatcccaaactgatcttccag
gctagccttgcaaatgctcagattttgattcccaccaatcaggccagtgtaagcagtatg
ctattggaaggacataccctcctggcccttgctactacaatgtattctcctgggggtgtc
agccaggttgttcagaatgaagaaaatgaaaactgtttgaagaaagtggatccccagcta
ttgaagatggcattaactccttaccccaagctaaaaactgctctcttcccacagtgcatt
cctcctagtgtcctgccatctgatattacactctaccaccttattcagtcgttatcaccc
tttgatcctagcagattgtttggctggcagtctgctaacacactagctataggagatgca
tggagtcatctcccacatttctctagccctgacctggttaataaatatgctgtagtggaa
cgtctgaattttgcttattatttacatcatggacggccatcatttgcatttggtactttt
ctggtgcaggaattaatcaagagcaagactcccaagcagctgatccagcaagtaggcaat
gaagcctatgtcatagggctctcctccttccacataccttcagtaggagctgcatgtgtt
tgtttcttagaattgcttggccttgacagcctcaaactcagagttgatatgaaagtggcc
aatataattttgagatacaagtgcagaaatgaagatgctcagtacagctttatcagagag
tctgtagccgaaaaactatctaaactagccgatggtgaaaaggcaaccacagaagaattg
cttgttctcttagaagaaggtacatggaacagcattcagcaacaggaaataaagaggtta
tccagtgaatgtagcagccagtgggcattagtggtacagttctgcaggctacacgatatg
aaactaagcatatcttaccttagagaatgtgccaaagcaaatgattggctgcagttcatt
attcacagccaactccacaactaccacccaccagaggtgaaatctcttatccagtacttc
agcccagtcattcaagaccacttaaggctggcttttgagaacttgcccttagtgcccacc
tccaaaatggacatcagtcaagtctgcaataagtcctcccaggaacttcagggaagcaaa
gaagtgatgaccgatttatttgaaattctgctccaatgctcagaggagccagactcctgg
cactggcttctggttgaagcagtgaaacaacaggcgcctatcctcagtgttctggcctca
tgtctccagggtgccagtgccatttcttgtctctgtgtttggatcatcacttctgtggag
gacagtgttgcaactgaagcaatgggatacattcaggactcgatagaggaccatacctgg
aaccttgaggatctttcagtcatctggagaacattattaacaagacagaagagcaaaact
ctcatcagaggtttccaacttttctttaaggattccccattactgttggtgatggagatg
tatgaactgtgtatgtttttcaagaattataaagaagctgaagctaaacttctggagttt
caggagagccttgaaatacttaacacagcagccacaaaggtccaccctgtcatccctgct
atgtggctggaggatcaggtgtgtttccttttgaagcttatgctacagcagtgtaagacc
ccatatgagctggggaagcttttacagctctttgttgaaagagagcatctcttctctgat
ggtccagatgtgaaaaagctgtatgtcctttgccaaattttgaaggatacatccatagcc
attaatcatataattattacctgctacagcattgagaattttcagcatgaatgtaaatct
attttggaaagactgcagacagacgggcagttcgctttggccaggagggtagcagaatta
gctgagttacctgtggacaacttggttattaaagagataacacaggaaatgcagactcta
aaacacattgaacagtggtcactaaaacaagcaagaattgacttctggaaaaaatgccat
gagaattttaagaaaaattcaatttcaagcaaagcagcttcttcctttttctcaactcag
gcccatgtggcatgtgagcacccagctggatggagcagcattgaggaacgccatctgctg
ctcactttggcagggcactggcttgcccaagaggacgtagtgcccttggacaagctggag
gagctggagaagcagatctggctctgccgcatcacccagcacactcttggaagaaatcag
gaggaaacagagcccaaattttctcgacagatctcaaccagtggtgaactttcctttgat
agtttagccagggagttttccttctccaagttggctgctctgaatacatcaaaatactta
gaacttaacagccttccatccaaagagacatgcgagaatagactggattggaaagagcag
gagtcactaaactttttgattgggcgcctactggatgatggctgtgtgcatgaagcaagt
agagtatgccggtattttcatttctataatcgagatgtcgccttggtgttgcactgcaga
gcactggcctcaggagaagctagtatggaggatctgcacccggagatccatgctctccta
caaagtgctgagctgcttgaggaagaacccgacattcccctgaggagagtccacagcact
tcaagtctggatagtcagaagtttgtgacagtgccctccagtgatgaagtggtgactaac
ctggaagtgctgacaagtaaatgcctccatggaaagaactactgtcgacaggtcctctgt
ctgtatgatcttgccaaggagttgggctgttcctacacagatgttgctgctcaggatggt
gaagccatgctccgggaaatcttggcctctcagcagcctgaccgatgcaaacgagcccag
gccttcatcagcacacagggccttaagccagatactgtggctgaactcgtggcagaagag
gtgacacgggagctgcttacttcatcacagggaacaggacataagcagatgttcaaccca
acagaggaaagccagacatttcttcagctgaccactctgtgtcaagaccacacattggta
ggcatgaagttgttggataagatttcctccgttccccatggggaattgtcttgcaccaca
gagctactgatcctggcccatcattgcttcaccctgacgtgccacatggagggcatcatc
cgagtcctacaggccgcccggatgctcacagataaccacctggcccccagtgaggagtat
ggactggtggtacggctcctcactggcattggaaggtacaatgagatgacatacatattt
gatttgctgcataaaaagcactactttgaagtgctgatgaggaagaagttggatccgagt
ggtaccctgaagacagccctgctggactacatcaaacgctgccgtcctggagacagtgag
aagcacaatatgattgccctgtgcttcagcatgtgccgggagattggcgagaaccacgag
gcagctgcccgcatccaactgaaattgattgagtctcagccctgggaggacagtctcaag
gatgggcaccagctgaagcaactgctgctgaaggccctgactctgatgctggatgcagca
gagagttatgccaaggactcttgtgtgcgacaggcccagcactgtcagcggctcaccaag
ttgataactctgcagattcactttctgaacactggccagaacacaatgcttatcaacttg
ggccgccacaagctaatggactgtattctggccctacctcggttctaccaggcttctatt
gtggctgaggcctatgattttgttccagattgggctgaaattttataccagcaagtgata
cttaaaggagactttaattacttggaagaatttaagcagcaaaggttattaaagtccagt
atatttgaagagatttccaaaaaatataaacaacatcagcctactgacatggtcatggaa
aacctgaagaaattactcacatattgtgaagatgtttacctgtattacaagttggcatat
gaacacaagttttatgaaatcgtaaatgtgcttctgaaggaccctcagacaggttgctgt
ctaaaggacatgctagcaggttag
DBGET
integrated database retrieval system
