Trachypithecus francoisi (Francois's langur): 117075011
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Entry
117075011 CDS
T07225
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn04820
Cytoskeleton in muscle cells
tfn04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117075011 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
117075011 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tfn00536
]
117075011 (COL11A1)
Glycosaminoglycan binding proteins [BR:
tfn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117075011 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
117075011
NCBI-ProteinID:
XP_033052901
LinkDB
All DBs
Position
Unknown
AA seq
1806 aa
AA seq
DB search
MEPWSSRWKTKRWLWDFTLTTLALTFLFQAREVRGAAPVDVLKALDFHSSPEGISKTTGF
CTNRKNSKDSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCNKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS
PDCDSSAPKAAQAQEPQIDEYEPEDIIEYDYEYGEAEYKEAESVTEGPTVTEETIAQTEA
NIVDDFQEYNYGTMESYQTEAPRRVSGTNEPNPVEEIFTEEYLTGEDYDSQRKNSEDTLY
ENKEIDDRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHG
AYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLP
GADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP
GPVGGPGSAGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR
GFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP
GAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP
GLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK
GEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP
GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP
GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT
GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKD
GPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ
GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK
GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ
GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEA
GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP
GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK
GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP
GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP
GPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSSKKTRRHTEG
MQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDG
EYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKL
LSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDE
EMSYDNNPFIKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG
PVCFLG
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggagccgtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccttaaca
accctcgcattgactttcctcttccaagctagagaggtcagaggagctgctccagttgat
gtactaaaagcactagattttcacagttctccagagggaatatcaaaaacaacggggttt
tgcacaaacagaaagaattctaaagactcagatactgcttacagagtttcaaagcaagca
caactcagtgccccaacaaaacagttatttccaggtggaacttttccagaagacttttca
atattatttacagtgaaaccaaaaaaaggaattcagtctttccttttatctatatataat
gaacatggaattcagcaaattggtgttgaggttggaagatcacctgtttttctgtttgaa
gaccacactggaaaacctgccccagaagactatcccctctttagaactgttaacatcgct
gatgggaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaacaagaaaaccacgaaaccacttgatagaagtgagagagcaattgttgatacc
aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatc
cagcagtttttgatcacaggtgaccccaaggcagcatatgactactgtgagcattatagt
ccagactgtgactcttcagcacccaaggctgctcaggctcaggaacctcagatagatgag
tatgaaccagaggatataatcgaatatgactatgagtatggggaagcagagtataaagag
gctgaaagtgtaacagagggacccactgtaactgaggagacaatagcacagacggaggca
aatatcgttgatgattttcaagaatacaactatggaacaatggaaagttaccagacagaa
gctcctaggcgtgtttctgggacaaatgagccaaatccagttgaagaaatatttactgaa
gaatatctaacgggagaggattatgattcccagaggaaaaattctgaggatacactatat
gaaaacaaagaaatagacgacagggactctgatcttctggtagatggagatttaggcgaa
tatgatttttatgaatataaagaatatgaagataaaccaacaagcccccctaatgaagaa
tttggtccaggtgtaccagcagaaactgatattacagaaacaagcataaatggccatggt
gcatatggagagaaaggacagaaaggagaaccagcagtggttgagcctggtatgcttgtc
gaaggaccaccaggaccagcaggacctgcaggtattatgggtcctccaggtctacaaggc
cccactggaccccctggtgacccgggcgataggggtcccccaggacgtcctggcttacca
ggggctgatggtttacctggtcctcctggtactatgttgatgttaccgttccgttatggt
ggtgatggttccaaaggaccaacaatctctgctcaggaagctcaggctcaagctattctt
caacaggctcggattgctctgagaggcccacctggcccaatgggtctaactggaagacca
ggtcctgtgggggggcctggttcagctggggccaaaggtgagagtggcgatccaggtcct
cagggccctcgaggcgtccagggtccccctggtccaacaggaaaacctggaaaaaggggt
cgtccaggtgcagatggaggaagaggaatgccaggagaacctggggcaaagggagatcga
gggtttgatggacttccaggtctgccaggtgacaaaggtcacaggggtgaacgaggtccg
caaggacctccaggtcctcctggtgatgatggaatgaggggagaagatggagaaattgga
ccaagaggtcttccaggtgaagctggcccacgaggtttgctgggtccaaggggaactcca
ggagctccagggcagcctggtatggcaggtgtagatggccccccaggaccaaaagggaac
atgggtccccaaggggagcctgggcctccaggtcaacaagggaatccaggacctcagggt
cttcctggtccacaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaacca
ggacttgctggacttcctggtgctgatgggcctcctggtcatcctgggaaagaaggccag
tctggagaaaagggtgctctgggtcctcctggtccacaaggtcctattggctaccctggc
ccccgaggagtcaagggagcagatggtgtcagaggtctcaagggatctaaaggtgaaaag
ggtgaagatggttttccaggattcaaaggtgacatgggtctaaaaggtgacagaggagaa
gttggtcagattggaccaagaggggaagatggccctgaaggcccgaaaggtcgagcaggc
ccaaccggagacccaggtccttcaggtcaagcaggagaaaagggaaaacttggagttcca
ggattaccaggatatccgggaagacaaggtccgaagggttccactggattccctgggttt
ccaggtgccaatggagagaaaggtgcacggggagtagctggcaaaccaggccctcggggt
cagcgcggtccaacgggtcctcgaggttcaagaggtgcaagaggtcccactgggaaaccc
gggccaaagggcacttcaggtggtgatggccctcctggccctccaggtgaaagaggtcct
caaggacctcagggtccagttggattccctggaccgaaaggccctcctggaccacctggg
aaggatgggctgccaggacaccctgggcaacgtggggagactggatttcaaggcaagacc
ggccctcctgggccagggggagtggttggaccacagggcccaaccggcgagactggtcca
ataggggaacgtgggcatcctggccctcctggccctcctggtgagcaaggtcttcctggt
gctgcaggaaaagaaggtgcaaagggtgatccaggtcctcaaggtatttcagggaaagat
ggaccagcaggattacgtggtttcccaggggaaagaggtcttcctggagctcagggtgca
cctggactgaaaggaggggaaggtccccagggccccccaggtccagttggctcaccagga
gaacgtgggtcagcaggtacagctggcccaattggtttaccagggcgcccgggacctcag
ggtcctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaagggcct
gcagggagagatggagttcaaggtcccgttggtctcccagggccagctggtcctgccggc
tctcctggggaagacggagacaagggtgaaattggtgaaccaggacaaaaaggcagcaag
ggtgacaaaggagaaaatggtcctcctggtcccccaggtcttcaaggaccagttggtgcc
cctggaattgccggaggtgatggtgaaccaggtcctagaggacagcaggggatgtttggg
caaaaaggtgatgagggcgccagaggcttccctggacctcctggtccaataggtcttcag
ggtctgccaggcccacctggtgaaaaaggtgaaaatggggatgttggtcccatgggtcca
cctggtcctccaggcccaagaggccctcagggtcccaatggagctgatggaccacaagga
cccccaggatctgtaggttcagttggtggtgttggagaaaagggtgaacctggagaagca
gggaacccaggccctcctggtgaagcaggcgtaggcggtcccaaaggagaaagaggagag
aaaggggaagctggtccacctggagctgctggacctcctggtgccaaggggccaccaggt
gatgatggccctaaaggtaacccgggccctgttggttttcctggagatcctggtcctcct
ggggaacctggccctgcaggtcaggatggtgttggtggtgacaagggtgaagatggagat
cctggccaaccgggtcctcctggtccatctggtgaggctggcccaccaggtcctcctgga
aaaagaggtcctcctggagctgcaggtgcagagggaagacaaggtgaaaaaggcgcaaag
ggagaagcaggtgctgaaggtcctcctggaaaaaccggcccagtcggtcctcagggacct
gcaggaaagcctggtccagaaggtcttcggggcatccctggccctgtgggagaacaaggt
ctccctggagctgcaggccaagatggaccaccgggtcctatgggacctcctggcttacct
ggtctcaaaggtgaccctggctccaagggtgaaaagggacatcctggtttaattggcctg
attggtcctccaggagaacaaggggaaaaaggtgaccgagggctccctggaactcaagga
tctccaggagcaaaaggggatgggggaattcctggtcctgctggtcccttaggtccacct
ggtcctccaggcttaccgggtcctcaaggcccaaagggtaacaaaggctctactggaccc
gctggccagaaaggtgacagtggtcttccagggcctcctgggcctccgggtccacctggt
gaagtcattcagcctttaccaatattgtcctccaaaaaaacgagaagacatactgaaggc
atgcaagcagatgcagatgataatattcttgattactcagatggaatggaagaaatattt
ggttccctcaattccctgaaacaagacatcgagcatatgaaatttcctatgggtactcag
accaatccagcccgaacttgtaaagacctgcaactcagccatcctgacttcccagatggt
gaatattggattgatcctaaccaaggttgctcaggagattccttcaaagtttactgtaat
ttcacatctggtggtgagacttgcatttatccagacaaaaaatctgagggagtaagaatt
tcatcatggccaaaggagaaaccaggaagttggtttagtgaatttaagaggggaaaactg
ctttcatatttagatgttgaaggaaattccatcaatatggtgcaaatgacattcctgaaa
cttctgactgcctctgctcggcaaaatttcacctaccactgtcatcagtcagcagcctgg
tatgatgtgtcatcaggaagttatgacaaagcccttcggttcctgggatcaaatgatgag
gagatgtcctatgacaataatcctttcatcaaagcactgtatgatggctgtgcgtccaga
aaaggctatgaaaagactgtcattgaaatcaatacaccaaaaattgatcaagttcctatt
gttgatgtcatgatcaatgactttggtgatcagaatcagaagttcggatttgaagttggt
cccgtttgttttcttggctaa
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integrated database retrieval system
