Trachypithecus francoisi (Francois's langur): 117078318
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Entry
117078318 CDS
T07225
Symbol
COL4A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn04151
PI3K-Akt signaling pathway
tfn04510
Focal adhesion
tfn04512
ECM-receptor interaction
tfn04820
Cytoskeleton in muscle cells
tfn04926
Relaxin signaling pathway
tfn04933
AGE-RAGE signaling pathway in diabetic complications
tfn04974
Protein digestion and absorption
tfn05146
Amoebiasis
tfn05165
Human papillomavirus infection
tfn05200
Pathways in cancer
tfn05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117078318 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117078318 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117078318 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117078318 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
117078318 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
117078318 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117078318 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
117078318 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117078318 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
117078318 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
117078318 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfn04147
]
117078318 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
tfn00536
]
117078318 (COL4A6)
Exosome [BR:
tfn04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117078318 (COL4A6)
Glycosaminoglycan binding proteins [BR:
tfn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117078318 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117078318
NCBI-ProteinID:
XP_033057755
LinkDB
All DBs
Position
Unknown
AA seq
1687 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPS
GPQGFTGSTGLSGLKGERGSPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPSSFKGMKGDPGLPGLDG
ITGPQGAPGSPGAVGPAGPPGLQGPPGPPGPPGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGSTGEKGEKGIPGLPGPRGP
MGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGEKGDIGLPGPDVFIDIDGAVISGNPGDP
GVPGLSGLKGDEGIQGLRGPSGVPGSPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAPG
LPGRDGLPGPPGPPGPPSPEFETKTLHNKEPGFPGLRGEQGPKGNPGLKGIKGDSGFCAC
DGGVPNTGPPGEPGPPGPRGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGSPGPSGPKGK
KGEPILSTVSGMPGDRGDSGSQGFPGIIGKPGNDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHPGPPGLPGIGLPGLPGPRGLPGDKGKDGLPGQQGPPGSKGITLPCIIPGSYG
PSGFPGTPGFPGPKGSRGLPGTPGQPGSSGXKGKPGSPGLVHLPELPGFPGPRGERGLPG
FPGLPGKDGLPGTMGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGDKGLLGDSGLPGL
KGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGTSGHPGK
KGTRGEKGPPGSIVKKGLPGLKGLPGNPGLIGLKGSPGSPGVAGLPALSGPKGEKGSVGF
IGFPGIPGLPGIPGTRGXKGIPGSTGKMGPSGHAGTPGEKGDRGNLGPVGIPSPRRPMSN
LWLKGDKGSQGSAGSDGFPGPRGDKGEAGQPGPPGLPGASGLPGTIKGVSGKPGPPGFMG
IRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGTSGLPGLKGDNGQTLEISGSPGPK
GQPGESGFKGTKGRDGPIGNIGFPGNKGEDGKVGVSGDVGLRGALGFPGVAGMRGDPGLP
GSSGRQGAIGPLGPPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPG
PKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRP
GLDGERGRPGPPGPPGPTGPSSNQGNTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELGLK
GMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPQGAPGQTPTAEAVQVPPGPLGL
PGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGF
EGAPGQQGPFGMPGTPGQSARVGYTLVKHSQSEQVPLCPIGMSQLWVGYSLLFVEGQEKA
HNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQY
ISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSC
LEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHTRVSRC
QVCMKSL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggagagaagtcttatggaaagccgtgtgggggccaagactgcagtgggagctgtcag
tgttttcctgagaaaggagcgagagggcgacctggaccaattggaattcaaggcccatca
ggtcctcaaggattcactggctctactggtttatcgggattgaaaggagaaaggggttcc
ccaggccttctgggaccttatggaccaaaaggagataagggtcccatgggagttcctgga
tttcttggcatcaatgggattccgggccatcctggacagccaggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgtcggatttccaggccctgatggctat
cctgggcttctcggaccacctgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaagtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggcccacaaggagcacctggatctcctggagctgtaggacctgcaggaccacca
ggattacaaggtcctccagggcctcctggtcctcctggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggatccaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggatctactggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccaaggccctccagggcaacagggcaagaaagggaccctggga
tttcctgggcttaatggattccaaggaattgagggtgaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcaggtaatcctggagaccct
ggtgtacctggcctctcaggccttaaaggagatgaaggcatccagggcctgcgtggccca
tctggtgtccctggctcaccagcattatcaggtgtcccaggagccctagggcctcaggga
tttccagggctgaagggggaccaaggaaacccaggccgtaccacaattggagcacctggc
ctccctggcagagatggtttgccaggcccaccaggtccaccaggcccacctagtccagaa
tttgagaccaaaactctacacaacaaagagccagggttccctggtctccgaggagaacaa
ggtccaaaaggaaacccaggcctcaaaggaataaaaggagactcaggtttctgtgcttgt
gacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtccacggggt
ctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggtgcacag
ggcccagcaggggctccaggcttagttgggtctccgggtccttcaggacccaaaggaaag
aagggggaaccaattctcagtacagtctcaggaatgccaggggatcgcggtgattctggc
tcccagggcttccctggtataataggaaaaccaggcaacgacggagtaccaggtctacca
ggtctgccaggacttccgggtgatggtgggcagggcttcccaggtgaaaaggggttacct
ggacttcctggtgaaaaaggccatcctggtccacctggcctcccgggaattgggttacca
ggacttcctggaccccgtgggcttcctggagataaaggcaaggatggattaccgggacaa
caaggccctcctggatctaagggaatcaccctgccctgtattattccggggtcatatggt
ccatcaggatttccaggcactcccggattcccaggccctaaagggtcccgaggcctccct
gggaccccaggccagcctggatcaagtgganataaaggaaagccagggagtccaggattg
gttcatcttcctgaattaccaggatttcctggacctcgtggggagaggggcttgcctggg
tttcctgggctccctggaaaagatggcttgcctgggacgatgggcagtccaggtttacct
ggttccaagggagccactggtgatatctttggtgctgaaaatggtgctccgggggaacaa
ggcctacaaggattaacaggggacaaaggacttcttggagactctggccttccaggactc
aagggtgtgcacgggaagcctggcttgctaggccccaaaggtgagcggggcagccctgga
acaccaggacaggtgggacagccaggcaccccaggatctagtggtccgtatggcatcaag
ggcaaatctgggctcccaggagcgccaggcttcccaggcacctcagggcatcctggaaag
aaaggaacaagaggcgagaaaggccctcctggatcaattgtaaagaaagggctgccaggg
ctaaaaggccttcctggaaatccaggcctaatagggctgaaaggaagcccaggctctcca
ggggtcgctgggttgccagccctctctggacccaagggagaaaaggggtctgttggattc
ataggttttccaggaataccaggtctgcctggtatccctggaacaagagganttaaagga
attccaggatcaaccggaaaaatgggaccatctggacacgctggcactcctggtgaaaag
ggagacagaggcaatctggggccagtcggaatacctagtccaagacgtccaatgtcaaac
ctttggctcaaaggagacaaaggctctcaaggctcagccggatccgatggatttccaggg
ccaagaggtgacaaaggagaggctggtcaacctgggccaccaggcctgcctggagcttct
ggcctcccaggcactatcaaaggagttagtggaaagccaggtccccctggcttcatggga
atccggggcttacctggcctgaaggggtcctctgggataacaggtttcccaggaatgcca
ggagaaagtggttcacaaggtatcagagggtcgcctggactcccaggaacatctggtctc
ccaggcctgaaaggagacaacggccagacacttgaaatttccggtagcccaggacccaag
ggacaacctggtgaatctggttttaaaggcacaaaaggaagagatggaccaataggcaat
ataggcttccctggaaacaaaggtgaagatggaaaagttggtgtttctggagatgttggc
cttcgtggagctctagggtttccaggggttgccggcatgagaggagatccaggacttcca
ggctcctctggtcgtcaaggggcaattgggcccctaggaccccccggattaataggaccc
aaaggcttccctggatttcctggtttacatggactgaatgggcttccgggaaccaagggt
acccatggcactccaggacctagtatcactggtgtgcccgggcctgctggtctccctgga
cccaaaggagaaaaaggatatccaggaattggcatcggagctccagggaagccgggcctg
agagggcaaaaaggtgatcgaggtttcccaggtctccagggccccgctggtctccccggt
gccccaggcatctccttgccctcactcatagcaggacagcctggtgaccccgggcgacca
ggcctagatggagaacgaggccgcccaggcccccctggacccccaggtcccactgggcca
tcctcgaatcaaggcaacaccggagaccctggcttccctggaattcctggacctaaaggg
cctaagggagaccaaggaattccaggtttttctggccttcctggagagctaggactgaaa
ggcatgagaggtgagcctggcttcatggggactccaggcaaggttgggccacctggagac
ccaggatttcccgggatgaaggggaaggcagggccaagaggctcttctggcccccaaggt
gctcctggacaaacaccaactgcagaagctgtccaggttcctcctggacccttgggtcta
ccagggatcgatggcatccctggcctcactggggaccctggggctcaaggccctgtaggc
ctacaaggctccaaaggtttacctggcattcccggcaaagatggtcccagtgggctccca
ggcccacctggggctcttggtgatcctggtctgcctggactgcaaggccctccaggattt
gaaggagctcccgggcagcaaggccccttcgggatgcctggaacgcctggccagagcgcg
agagtgggctacacgttggtaaagcacagccagtcggaacaggtgcctctgtgtcccatc
gggatgagccagctatgggtggggtacagcttactgttcgtggaggggcaagagaaagcc
cataaccaggacctgggctttgctggctcctgtctgccccgcttcagcaccatgcccttc
atctactgcaacatcaacgaggtgtgccactatgccaggcgcaatgataaatcctactgg
ctctccactactgcccctatccccatgatgcccgtcagccagacccagattccccagtac
atcagccgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagccaggac
atcaccatcccgcagtgccccctgggctggcgcagcctctggattgggtactccttcctc
atgcacactgccgctggtgccgagggtggaggccagtccctggtctcacctggctcctgc
ctagaggactttcgggccacccctttcatcgagtgcagtggtgcccgaggcacctgccac
tactttgcaaacaaatacagcttctggttgaccacagtggaggagaggcagcagtttggg
gagttgcctgtgtctgaaacgctgaaagctgggcagctccacactcgagtcagtcgctgc
caggtgtgtatgaaaagcctgtag
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