Trachypithecus francoisi (Francois's langur): 117083899
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Entry
117083899 CDS
T07225
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfn04040
]
117083899 (SCN11A)
Ion channels [BR:
tfn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117083899 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
117083899
NCBI-ProteinID:
XP_033067967
LinkDB
All DBs
Position
Unknown
AA seq
1791 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKDKSKDQTGEVPHPRPQLDLKASR
KLPNLYGDIPRELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKHALFIFGPFNSIRS
LAIRVSVHSLFSMFIIGTVIINCVFMATGPAKNSNSNNTDIAECVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGIAIVSCIPGITIKLLSLRTFRVFRALKAISVVSRLK
VIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLNLKCISKDCKNISNLEAYDHC
FEKKENSTELKMCGIWMSNSTCSTQYECNHTKINPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRTAGLYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLETSYFTPQKRKLFGIKKRKSFFLRESGKGQPP
GSDSDEDSQKKPQLLEQTKRLSQNLSLDHFDEHRDPLQRQRALSAVSILTITMKEQEKSQ
EPCLPCGENLASKYLVWNCCPPWLYIKKVLRTVMTDPFTELAITICIIINTVFLAMEHHK
MEPSFEKMLNTGNLVFTSIFMAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVMNSK
FQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGM
QLFGHSFNSQKSPKLCNLTGPTVSCLRHWHMGDFWHSFLVVFRILCGEWIENMWECMQEA
NASSSLCVIVFILITVIGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQLALDRFR
RAFCFVRHTLEHFCHKWCRKQKLPKQKEMTGGCTAQSKDIIPLVMEMKRGSETQEELGIL
TSVPKTLGIRHDWTWLAPLAEEEDDAEFSGEDNAQPITQSEAEQQAYELHQENKKPTSQG
VQSVEIDMFPEDEPHLTIQDPRKKSDVTSILSECSTIDLQDGFGLLPEMVPKKQPERCLP
KGFGCCFSCCSMDKRKPHWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHL
ESQPKIQELLNCTDVIFTHIFILEMVLKWVAFGFGKYFTSAWCCLDFIIVIVSVTTLINL
KELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLFVCLIFWLIFCILGVHFF
SGKFGKCINGTDSVINYTIIANKSQCESGNFSWINQKVNFDNVGNAYLALLQVATFKGWM
DIIYAAVDSREKEQQPEFESNSLGYIYFVVFIVFGSFFTLNLFIGVIIDNFNQQQKKLGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDIVTSQIFDIIIISLIILNM
ISMMAESYDQSKAVKSTLDHLNWVFVVIFTLECLIKIFALRQYYFTNGWNLFDSVVVLIS
IVSTMISTLESQEYIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNI
GLLLFLIMFIYAILGMNWFSKVNPESGIDDIFNFKTFAGSMLCLFQISTSAGWDSLLSPM
LRSKESCNSSSENCHLPGIATSYFVSYVIISFLIVVNMYIAVILENFNTATEESEDPLGE
DDFDIFYEVWEKFDPEATQFIEYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRL
HCMDVLFAFTARVLGGSDGLDSMKAMMEEKFMETNPLKKLYEPIVTTTKRKEEERCAAVI
QKAFRKYMMKVTKGDQGDQSDLENRPHSPLQTLCNGDLSSFGVVKGKVHYD
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaatctttccagatgagcggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaggagaaagataagtct
aaagaccagacaggagaagtaccccatcctcggcctcagcttgacctaaaggcctccagg
aagttgcccaatctctatggcgacattcctcgtgagctcataggaaagcccctggaagac
ttggacccattctacagaaatcacaagacatttatggtgttaaacaaaaagaggacaatc
taccgcttcagtgccaagcatgccttgttcatttttgggcctttcaattcaatcagaagt
ttagccattagagtctcagtccattcattgttcagcatgttcataatcggcactgttatc
atcaactgcgtgttcatggctacagggcctgctaaaaacagcaacagcaacaatactgac
attgcagagtgtgtcttcactgggatttatatttttgaagctttgattaaaatactggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcatcggaatagcgattgtgtcatgtattccaggaatcaccatcaaactgttgtcc
ctgcgtaccttccgtgtgttcagagctttaaaagcaatttcagtagtttcacgtctgaag
gtcatcgtgggggccttgctgcgctctgtgaagaagctggtcaatgtgattatcctcacc
ttcttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagcctgaac
ctgaaatgcatctcgaaggactgtaaaaatatcagtaacctggaagcttatgaccattgc
tttgaaaagaaagaaaattcgactgaattaaaaatgtgtggcatctggatgagtaacagt
acctgttccacacaatatgaatgtaaccacaccaaaattaatcctgactataattatacg
aattttgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcc
tgggagaagctttatcaacagaccctgcgtactgctggactctactcagtcttcttcttc
attgtggtcattttcctgggctccttctacctgattaacttaaccctggctgttgttacc
atggcgtatgaggagcagaacaagaatgtagctgcagagatagaggccaaggaaaagatg
tttcaggaagcccagcagctgttaaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttacttccctcgaaacatcatattttaccccccaaaagagaaagctc
tttggtattaagaaaaggaagtccttctttttgagagagtctgggaaaggccagcctcca
gggtcagattctgatgaagattcccaaaaaaagccacagctcctagagcaaaccaaacga
ctgtcccagaatctatcactggaccactttgatgagcatagagatcctctccaaaggcag
agagcactgagtgctgtcagcatcctcaccatcaccatgaaggaacaagaaaaatcacaa
gagccttgtctcccttgcggggaaaacctggcatccaaatacctcgtgtggaactgctgc
cccccgtggctgtacattaagaaggtcctgagaacagtgatgactgacccatttactgag
ctggccatcaccatctgcatcatcatcaacactgtcttcttggccatggagcatcacaag
atggagcccagttttgagaagatgttgaatacagggaatttggttttcactagcattttt
atggcagaaatgtgcctaaaaatcattgctctcgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttgcagatgtaatgaacagtaaa
tttcaaaagagaagctggccattcttgcgttccttcagagtgctcagggtcttcaagtta
gctaaatcctggccaactttgaacacactaattaagataatcggcaactctgtcggagcc
cttggaagcctgactgtggtcctggtcattgtgatctttattttctcagtagttggcatg
cagctttttggccatagcttcaattctcaaaagagtccaaaactctgtaacctgacaggc
ccaacagtctcatgtttacggcactggcacatgggggatttctggcactccttcctagtg
gtgttccgcatcctctgcggggaatggatcgaaaatatgtgggaatgtatgcaagaagcg
aatgcatcatcatcattgtgtgttattgtcttcatattgatcacggtgataggaaaactt
gtggtgctcaacctcttcattgccttactgctcaattcctttagcaatgaggaaagaaat
ggaaacttagaaggagaggccaggaaaactaaagtccagttagcactggatcgattccgc
cgggctttttgttttgtgagacacactcttgagcatttctgtcacaagtggtgcaggaag
caaaagttaccaaagcaaaaagagatgacaggaggctgtactgcacaaagcaaagatatc
attcccctggtcatggagatgaaaaggggctcagagacccaggaggagcttggtatacta
acctctgtaccaaagaccttgggcatcaggcatgactggacttggttggcaccacttgca
gaggaggaagatgatgctgaattttctggtgaagataacgcacagcccatcacacaatca
gaggcagaacagcaggcctatgagctccatcaggagaacaagaagcccaccagccaggga
gttcaaagtgtggaaattgacatgttccctgaagatgagcctcatctgaccatacaggat
ccccgaaagaagtctgatgttaccagtatactatcagaatgtagcaccattgatcttcag
gatggctttggattgttacctgagatggttcccaaaaagcaaccagagagatgtttgccc
aaaggctttggttgctgcttttcatgctgtagcatggacaagagaaagcctcactgggtc
atttggtggaacctgcggaaaacctgctaccaaatagtgaaacacagctggtttgagagc
tttattatctttgtgattctgctgagcagtggggcactgatatttgaagatgttcacctt
gagagccaacccaaaatccaagagttactaaattgtactgacgttatttttacacatatt
tttatcctggagatggtactaaaatgggtagcctttggatttggaaagtatttcaccagt
gcctggtgctgccttgatttcatcattgtgattgtctctgtgaccaccctcattaactta
aaggaattgaagtccttccgaactctgcgagcactgaggcctcttcgtgcgctgtcccag
tttgaaggaatgaaggtggtggtcaatgctctcataggtgccatacctgccattctgaat
gttttgtttgtctgcctcattttctggctcatattttgtattctgggagtacacttcttt
tctggaaaatttgggaaatgcattaatggaacagactcagttataaattataccatcatt
gcaaataaaagtcaatgtgaaagtggcaatttctcttggatcaaccagaaagtcaacttt
gacaatgtgggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctggatg
gatattatatatgcagctgttgattccagagagaaagaacagcagccagagtttgagagc
aattcactcggttacatttacttcgtagtttttatcgtctttggctcattcttcactctg
aatctcttcattggtgttattattgacaacttcaaccaacagcagaaaaagttaggtggc
caagacatttttatgacggaagaacagaagaaatactataatgcaatgaaaaaattagga
tccaaaaaacctcaaaaacctattccacggcctctgaacaaatgtcaaggtcttgtgttc
gacatagtcacaagccagatctttgacatcatcatcataagtctcattatcctaaacatg
attagcatgatggctgaatcatacgaccaatccaaagccgtgaaatccacccttgaccat
ctcaactgggtctttgtggtcatctttacattagaatgtcttatcaaaatcttcgctttg
aggcaatactacttcaccaatggctggaatttatttgactctgtggtcgtgcttatttct
attgttagtacaatgatttctaccttggaaagtcaggagtacattcctttccctccaacg
ctcttcagaattgtccgcttggctaggattggccgaatcctgaggcttgtccgggctgca
cgaggaatcaggactctcctctttgctctgatgatgtcgctcccttctctgttcaacatt
ggtcttctactctttctgattatgtttatctatgccattttgggtatgaactggttttcc
aaagtgaatccagagtctggaattgatgatatattcaacttcaagacttttgccggaagc
atgctctgtctcttccagataagcacatcagcaggttgggattccctgctcagccccatg
ctgcgatcaaaagaatcatgtaactcctcctcagaaaactgccacctccctggcatagcc
acatcctactttgtcagttacgttatcatctcctttctcattgttgtcaacatgtacatt
gctgtgattttagagaacttcaatacagccactgaagaaagtgaggatcctttgggtgaa
gatgactttgacatattttatgaagtgtgggaaaagtttgacccagaagcaacacaattt
atcgaatattctgccctttctgactttgctgatgccttgcctgagcctttgcgtgtggca
aagccaaataaataccaatttctagtaatggacttgcccatggtgagtggtgatcgcctc
cactgcatggatgttcttttcgccttcaccgctagggtacttggtgggtctgatggcctg
gatagcatgaaagcaatgatggaagagaagttcatggaaaccaatcctctcaagaagttg
tatgaacccatagtcaccaccaccaagagaaaggaagaggaaagatgtgctgcggttatt
cagaaggcctttcgaaagtacatgatgaaggtgaccaagggtgaccaaggtgaccaaagt
gacttggaaaacaggcctcattcaccactccagactctttgcaatggagacttatctagc
tttggggtggtcaagggcaaggtccactatgactga
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integrated database retrieval system
