Trachypithecus francoisi (Francois's langur): 117086975
Help
Entry
117086975 CDS
T07225
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117086975 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfn03019
]
117086975 (SKIV2L)
Enzymes [BR:
tfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117086975 (SKIV2L)
Messenger RNA biogenesis [BR:
tfn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117086975 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
117086975 (SKIV2L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
117086975
NCBI-ProteinID:
XP_033072574
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MMETELLVLPPPDPLDLPLRAVELGCTGRWELLNLPGAPESSLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAVLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDEPTITDLNTWEEAEEEIDFE
KDLLTIPPGFKKGMDFAPKDRPTPVPGLLSLSYLLEPLDLGGGDEDENEAVGQPGGSRRD
AVSASPCSTPLARASSLEDLVLKEASTAVSAPEAPELPPQEQWAIPVDATSPVGDFYRLI
PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKRLGSLEEPDMTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKSLS
AGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQNRGPATPEVPYPDD
LVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAA
VTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRF
PAQYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGSQLPNTLKQGIERVRT
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagagctactcgtgctacctcctccagatcccctggacctaccccttcgg
gccgtggagctcggatgcacgggtcgctgggagctgctgaacttgcctggagctccagag
agcagccttccccatggcctccctccctgtgccccagatctgcagcaagaagcagaacag
ttgtttctgtcatccccagcctggctgcctctgcatggtgtggagcactcagcccgaaaa
tggcagaggaagacagatccctggtctcttttggctgtgctgggagccccagtcccatct
gacctacaggcccaaagacacccaaccacaggccagatactgggttacaaagaggtcttg
ctggagaacacaaatctctcggccacaacctccttgtctcttcgccggcctccagggcca
gcctcccagtccttatggggaaatccaactcagtatcccttctggccaggggggatggat
gaacccaccataacagatctgaacacatgggaggaggctgaggaggagatagactttgag
aaagatcttcttactattccacctggtttcaagaaaggcatggactttgcaccaaaagat
cgtccaactccagtgcctggactgctaagccttagctatctgttggagcctctggatttg
ggtgggggtgacgaggatgagaatgaggcagtgggacagccaggaggttccagaagggac
gctgtttcagcctctccctgcagtactcccctggcccgagcaagcagtttggaggaccta
gtgttgaaggaagcgtccacagctgtatccgccccagaagccccagagcttccacctcag
gagcagtgggccatacctgtggatgccacctcccctgttggtgatttctatcgcctcatt
ccccagccagccttccagtgggcatttgagccagatgtgtttcagaaacaggccatcctg
cacttggagcggcatgactctgtctttgttgcagctcacacatctgcaggaaaaacagtt
gtggctgaatatgccattgccctggcccagaaacacatgacacgcaccatctacacttcg
cccatcaaggccctgagcaaccagaagttccgggacttccgaaacacgtttggggatgtg
gggttgctcactggggatgtgcaactgcacccggaggcctcctgcctcatcatgaccaca
gagatccttcgctccatgctgtacagtggctcagatgttattcgggacctggagtgggtc
atctttgatgaggttcactatatcaacgatgccgagcgtggggtcgtgtgggaggaggtg
ctcatcatgctccctgaccacgtttctatcatccttctgagtgccaccgtccccaacgcc
cttgagtttgctgactggattgggcgactgaagcgtcgtcagatctatgtgattagcact
gtaacccgccccgtgcccctggagcactatcttttcacagggaacagctccaagacccag
ggggagctctttttgttgctggactcccgaggagccttccatacaaaagggtactatgca
gctgtggaggccaagaaggagagaatgagcaaacatgcccagacctttggggccaagcag
cccacacatcaggggggccctgcacaggaccgcggagtgtacctgtccctcctggcctcc
ctccgcacacgggcccagttgcctgtggtggtgttcaccttctcccggggccgctgtgat
gagcaggcctcaggcctcacctcccttgacctcaccaccagttcagagaagagtgagatc
cacctcttcctgcagcgctgccttgctcgcctccgtggctctgatcgccagctgccccag
gtcctgcacatgtcagagctcctgaatcgtggcctgggtgtgcaccatagcggcatcctg
cccatcctcaaggagatcgtggagatgctcttcagccgtggcctggtcaaggtcttgttt
gccacagagacctttgccatgggagtaaacatgccggctcgtacagtagtgtttgactcc
atgcgcaagcacgatggctccaccttccgggacctgctccctggggagtatgtgcagatg
gcaggccgggcagggcggaggggcctggaccccacaggcaccgttatcctgctctgcaag
ggccgagtgcccgagatggcagacctgcaccgcatgatgatggggaagccatcccagctg
cagtcccagttccgcctcacgtacactatgatcctcaacttgctgcgggtggatgccctc
agggtggaggacatgatgaagaggagcttctccgagtttccctcccgcaaggacagcaag
gcccatgaacaagccctggccgaactgaccaagaggctggggtctttggaggagcctgac
atgactggccaactggtcgacctgcctgaatattacggctggggggaggaactgacagag
acccagcacatgattcagcgacgcatcatggagtctgtgaacgggttgaagtctctctca
gcaggaagagtggtggttgtgaagaatcaggagcatcacaacgcactgggagtgatccta
caggtctcctcgaactccaccagcagagtattcacaaccctggtcttgtgtgataagccc
ttgtcccaggacccacagaacagggggccggccactccagaggtgccctatccagatgac
ctcgtgggattcaagctgttcctgcctgaagggccttgtgaccacaccgtggtcaagctc
cagccaggagatatggctgccatcaccaccaaagtgctccgggtgaatggggagaagatc
ttggaggacttcagcaagaggcagcagccaaaattcaagaaggatcctccccttgcagct
gtgaccactgctgtccaggaactactgcgtctggctcaggcttacccagctggacccccc
acccttgaccctgtcaatgacctgcagctcaaagatgtgtcagttgtagagggtgggctc
cgggcccggaagctggaggagctgatccggggggctcagtgtgtacacagcccccgtttt
cctgcccagtacctgaagctgcgagagcgaatgcagatacagaaggagatggagcggctg
cgcttcctactgtcagatcagtcactgctgctgcttcctgagtaccaccagcgagtagag
gtgctccgaaccctgggttatgtggacgaggcaggcaccgtgaagctggcagggcgggtg
gcttgtgccatgagcagccatgagttgctcctcactgagctcatgtttgacaatgcacta
agcaccctgcggcctgaggagattgctgccttgctctctggcctggtctgccagagccct
ggggatgctgggagtcagctcccaaacaccctcaagcagggaatagaacgtgtccggact
gtggccaagcggattggtgaggtccaggtggcttgtggcctgaaccagacggtggaggaa
tttgtgggcgagctgaattttgggctagtcgaggttgtgtatgagtgggcccggggcatg
cccttctccgagttggcagggctctcagggacccctgagggcctggtggtccgctgcatt
cagcgcctggctgagatgtgtcgctcactgcggggggcagcccgcctagtaggagagcct
gtgctgggtgccaagatggagacagcggctaccttgctacggcgggatatcgtatttgcg
gccagcctctacacccagtga
DBGET
integrated database retrieval system
