Trachypithecus francoisi (Francois's langur): 117087994
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Entry
117087994 CDS
T07225
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117087994 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfn03041
]
117087994 (DHX38)
Enzymes [BR:
tfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117087994 (DHX38)
Spliceosome [BR:
tfn03041
]
Complex C
Other components
Step II factors
117087994 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
117087994
NCBI-ProteinID:
XP_033074740
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MGDTSEDASIHRLEGTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSKISSYKDWEESKDDQKDAEEEGGDQAGRNVRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDWKKEKSRDRDYDRKRDRDDRDRSRHSS
RLERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWESPSPTPSYR
DSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREEG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKAVTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN
NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVR
STKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaccagtgaggatgcctcgatccatcgattggaaggcactgatctggactct
caggttggtggtcttatttgcaagaccaaaagtgcggccagcgagcagcatgtcttcaag
gcccctgctccccgcccttcattactgggactggacttgctggcttccctgaaacggagg
gagcgagaggagaaggacgatggggaggacaagaagaagtccaaaatctcttcctacaag
gactgggaagagagtaaggatgaccagaaggatgccgaggaagagggcggtgaccaggct
ggccgaaatgtccggaaagacagacattatcgatctgctcgggtagaaactccatcccat
ccagggggtgtgagcgaagagttttgggaacgcagtcggcagagagagcgggagcggcgc
gaacatggtgtctatgcctcatccaaagaagaaaaggattggaagaaggagaaatcgcgg
gatcgagactatgaccgcaagagggacagagatgaccgggatagaagtaggcacagcagc
agattggagcgagatggagggtcagagcgtagcagcagaagaaatgagcctgagagccca
cgacatcgacctaaagatgcagccaccccttcaaggtctacctgggaggaggaggacagt
ggctatggctcctcaaggcgctcccagtgggaatcgccctccccgacgccttcctatcgg
gattctgagcggagccatcggctgtccactcgagatcgagacaggtctgtgaggggcaag
tactcggatgacacgcctctgccaactccctcctacaaatacaatgagtgggccgatgac
agaagacacttggggtccaccccacgtctgtccaggggtcgaggaaggcgcgaggaaggc
gaagaaggaatttcatttgacacggaggaggagcggcagcagtgggaggatgaccagagg
caagccgatcgggattggtacatgatggacgagggctatgatgagttccacaacccactg
gcctactcctctgaggactatgtgaggaggcgggagcagcacctgcacaaacagaagcag
aagcgcatttcagctcagcggagacagatcaatgaggataacgagcgctgggagacaaac
cgcatgctcaccagtggggtggtccatcggctggaggtggacgaggattttgaagaggac
aatgcagccaaggtgcatctgatggtgcacaatctggtgcctccctttctggatgggcgc
attgtcttcaccaagcagccggagccggtgatcccagtgaaggacgccacttctgacctg
gccatcattgctcggaaaggcagccaaacagtgcggaagcacagggagcagaaggagcgc
aagaaggctcagcacaaacactgggaactggctgggaccaaactgggagatataatgggt
gtcaagaaggaggaagaaccagataaagctgtgacggaggatgggaaggtggactacagg
acagagcagaagtttgcagatcacatgaagaaaaagagcgaagccagcagtgaatttgca
aagaagaagtccatcctggagcagaggcagtacctgcccatctttgcagtgcagcaggag
ctgctcactattatcagagacaacagcatcgtgatcgtggttggggagacagggagtggt
aagaccactcagctgacacagtacctgcatgaagatggttacacagactatgggatgatt
gggtgtacccagccccggcgtgtagctgccatgtcagtggccaagagagtcagtgaagag
atggggggcaaccttggtgaggaggtgggctatgccatccgctttgaagactgcacttca
gagaacaccttgatcaaatacatgactgatgggatcctgctccgagagtccctccgggaa
gctgacctggatcactacagcgccatcatcatggatgaggcccacgagcgctccctcaac
actgatgtgctcttcgggctgctccgggaggtggtggctcggcgctcagacctgaagctc
atcgtcacatcagccacgatggatgcagagaagtttgctgccttttttgggaatgtcccc
atcttccacatccctggccgcaccttccctgttgacattctcttcagcaagaccccacag
gaggattacgtggaggctgcagtgaagcagtccttgcaggtacacctgtcgggggcccct
ggggacatccttatcttcatgcctggccaggaagacattgaggtgacctcagaccagatt
gtggagcatctggaggaactggagaatgcacctgccctagccgtgctgcccatctactct
cagctgccttctgacctccaggccaaaatattccagaaggctccagatggcgttcggaag
tgcattgttgccaccaacattgccgagacgtctctgactgttgatggcatcatgtttgtt
atcgattctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctg
cagatctatcccattagccaggccaatgccaaccagcggtcagggcgagccggcaggacg
ggcccaggtcagtgtttcaggctctacacccagagcgcctacaagaatgagctcctgacc
accacagtgcccgagatccagaggaccaacctggccaacgtggtgctgctgctcaagtcc
cttggggtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatg
ctcaactccatgtatcagctctggatccttggggccctggacaacacaggtggtctgacc
tctaccgggcggttgatggtggagttcccgctggaccctgccctgtccaagatgctcatc
gtgtcctgtgacatgggctgcagttccgagatcttgctcatcgtctccatgctctccgtc
ccggccatcttctacaggcccaagggtcgagaggaggagagtgatcaaatccgggagaaa
ttcgctgtccctgagagcgatcatttgacctacctgaatgtctacttgcagtggaagaac
aataattactctaccatctggtgtaacgatcatttcatccatgctaaggccatgcggaag
gtccgggaggtgcgagctcaactcaaggacatcatggtgcagcagcggatgagcctggcc
tcgtgtggcactgactgggacatcgtcaggaagtgcatctgtgctgcctatttccaccaa
gcagccaagctcaagggaatcggggagtacgtgaacatccgcacagggatgccctgccac
ttgcaccccaccagctccctttttggaatgggctacaccccggattacatagtgtatcac
gagttggtcatgaccaccaaggagtacatgcagtgcgtgaccgctgtggacggggagtgg
ctggcagagctgggccccatgttctatagtgtgaaacaggcgggcaagtcacggcaggag
aaccgtcgtcgggccaaagaggaagcctctgccatggaggaggagatggcgctggccgag
gaacagctgcgagcacggcggcaggagcaggagaagcgcagcccgctgggcagtgtcaga
tctacgaagatctacactccaggccggaaagagcaaggggaacctatgacccctcgccgc
acgccagcccgctttggtctgtga
DBGET
integrated database retrieval system
