KEGG   Trachypithecus francoisi (Francois's langur): 117091491
Entry
117091491         CDS       T07225                                 
Symbol
LIG1
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tfn  Trachypithecus francoisi (Francois's langur)
Pathway
tfn03030  DNA replication
tfn03410  Base excision repair
tfn03420  Nucleotide excision repair
tfn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tfn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117091491 (LIG1)
   03410 Base excision repair
    117091491 (LIG1)
   03420 Nucleotide excision repair
    117091491 (LIG1)
   03430 Mismatch repair
    117091491 (LIG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfn03032]
    117091491 (LIG1)
   03400 DNA repair and recombination proteins [BR:tfn03400]
    117091491 (LIG1)
Enzymes [BR:tfn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     117091491 (LIG1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     117091491 (LIG1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     117091491 (LIG1)
DNA replication proteins [BR:tfn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    117091491 (LIG1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     117091491 (LIG1)
DNA repair and recombination proteins [BR:tfn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     117091491 (LIG1)
   NER (nucleotide excision repair)
    Other NER factors
     117091491 (LIG1)
   MMR (mismatch excision repair)
    Other MMR factors
     117091491 (LIG1)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C PucR DUF1685
Other DBs
NCBI-GeneID: 117091491
NCBI-ProteinID: XP_033079739
LinkDB
Position
Unknown
AA seq 919 aa
MQRSIMSFFHPKKEGKAKKPEKEASNSSRETEPPPKAALKEWNGVVSDSDSPVKRPGRKA
ARVLGSEGEEEDEALSPAKGQKPTPDCSQVSPPRPATSPENSASLSDTSPMDSSPSGIPK
RRTARKQLPKRTIQEVLEEQSADEDREAKRKKEEEEVETPEESLTEAEVATEKEGEDRDQ
PTTPPKPLKTSEAGTPTESVSEPEVTTRQELQEEEEQTKPPRSAPKTLSSFFTPRKPAIK
KEVKEEEPGAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKLGQKVPYLAVARTFEKIE
EVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQ
ATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSAST
AKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAV
VDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCRLSPGIPL
KPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPD
IISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAF
DLIYLNGQSLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCE
GLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLL
ASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPSA
VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ
SQIQNQQGEDSGSDPEDTY
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgcagcgaagtatcatgtcattcttccaccccaagaaagagggtaaagcgaagaagcct
gagaaggaggcatccaacagcagcagagagacggagccccctccaaaggcggcactgaaa
gagtggaatggagtggtgtctgatagtgactctccagtgaagaggccagggaggaaggcg
gcccgggtcctgggcagtgaaggggaagaggaggatgaagcccttagccctgctaaaggc
cagaagcctaccccggactgctcacaggtctccccgccccgtcctgccacatctcctgaa
aacagcgcttccctctctgacacctctcccatggacagctccccatcagggatcccgaag
cgtcgcacagctcggaagcagctcccgaaacggaccattcaggaagtcctggaagagcag
agtgcggacgaggacagagaagccaaaaggaagaaggaggaggaagaagtggagacccca
gaagaaagcctcacagaggctgaagtggcaacagagaaggaaggagaagacagggaccag
cccaccacacctcccaagcccctaaagacctccgaagcagggactccaacggaaagcgtt
tcggagcccgaggtgaccacaaggcaggaactgcaggaggaggaagagcagaccaagcct
ccccgcagcgctcccaagacactcagcagcttcttcaccccccggaagccagcaatcaaa
aaagaagtgaaggaggaggagccaggggctccaggaaaggagggagctgctgagggaccc
ctggacccatctggttacaatcctgccaagaacaactaccatcccgtggaagacgcctgc
tggaaactgggccagaaggtcccttacctggccgtggcccggacgtttgagaagatcgag
gaggtgtctgcccggctccggatggtggagacgctgagcaacttgctgcgctccgtggtg
gccctgtcgcctccagacctcctccctgtcctctacctcagcctcaaccaccttgggcca
ccgcagcagggcctggagcttggcgtgggtgatggtgtccttctcaaggcagtggcccag
gccacaggtcggcagctggagtccgtccgggctgaggcagctgagaagggcgacgtgggg
ctggtggccgagaacagccgcagcacccagaggctcatgctgccaccacctccgctcact
gcttccggggtcttcagcaagttccgtgacatcgccaggctcactggcagtgcttccaca
gccaagaagatagacatcatcaaaggcctctttgtggcctgccgccactcagaagcccgg
ttcatcgccaggtccctgagcggacggctgcgcctggggctggcagagcagtcggtgctg
gccgccctctcccaggctgtgagcctcacgcccccaggccaagaattcccaccagccgtg
gtggatgctgggaagggcaagacagcagaggccagaaagacatggctggaggagcaaggc
atgatcctgaagcagacgttctgcgaggtgcccgacctggaccgaattatccctgtgctg
ctggagcacggcctggaacgtctcccggagcactgcaggctgagcccagggattcccctg
aaaccaatgttggcccatcccacgcggggcgtcagcgaggtcctgaaacgctttgaggag
gcagctttcacctgcgaatacaaatacgatgggcagagggcacagatccacgccctggaa
ggcggggaggtgaagatcttcagcaggaatcaggaagacaacactggaaagtacccggac
atcatcagccgcatccccaagattaaactcccatcggtcacatccttcatcctggacacc
gaagctgtggcttgggaccgggaaaagaagcagatccagccattccaagtgctcaccacc
cgcaaacgcaaggaagtggatgcgtccgagatccaggtgcaggtgtgtttgtacgccttc
gacctcatctacctcaatggacagtccctggtacgtgagcccctttcccggcgccggcag
ctgctccgggagaactttgtggagacggagggcgagtttgtcttcgccacctctctggac
accaaggacgtcgagcagatcgccgagttcctggagcagtcggtgaaagactcctgcgag
gggctgatggtgaagaccctggatgtcgatgccacctacgagatcgccaagagatcgcac
aactggctcaagctgaagaaggactaccttgatggcgtgggtgacactctggacctggtg
gtgatcggcgcctacctgggccgggggaagcgggccggccggtacgggggcttcctgctg
gcctcctacgacgaggacagtgaggagctgcaggccatatgcaagcttggaactggcttc
agcgacgaggagctggaggagcatcaccagagcctcaaggccctggtgctgcccagcccc
cgcccttatgtgcggatagatggtgccgtgactccggaccactggctggaccccagtgct
gtgtgggaggtgaagtgtgccgacctctccctctctcccatctaccctgctgcgcggggc
ctggtggatagtgacaaggggatctcccttcgcttccctcggtttattcgagtccgtgaa
gacaagcagccggagcaggccaccaccagtgcacaggtggcctgtttgtaccggaagcaa
agtcagattcagaaccaacaaggcgaggactcaggctctgaccctgaagatacctactaa

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