KEGG   Trachypithecus francoisi (Francois's langur): 117092976
Entry
117092976         CDS       T07225                                 
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein isoform X1
  KO
K12857  Prp8 binding protein
Organism
tfn  Trachypithecus francoisi (Francois's langur)
Pathway
tfn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tfn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117092976 (SNRNP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tfn03041]
    117092976 (SNRNP40)
Spliceosome [BR:tfn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    117092976 (SNRNP40)
 Complex C
   U5 SnRNP specific factors
    117092976 (SNRNP40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EML WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N eIF2A Beta-prop_RIG_1st Beta-prop_NWD2_C Beta-prop_HPS5 Cytochrom_D1 WDR54 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 117092976
NCBI-ProteinID: XP_033083281
LinkDB
Position
Unknown
AA seq 403 aa
MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIM
LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD
GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD
IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG
LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI
AAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPISLRVTNSDASRGQRGKTTG
EAAAFKTVIGGQCHTVGHCTNLRFSSQGFLGHTCAIHLCFRSS
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgatagaacaacagaagcgtaagggcccagagttgccgctggttccagtcaagcggcag
cggcatgagttgctgctgggagcggggtcgggcccaggagccgggcagcagcaggcgacg
ccgggagctttgctgcaagcgggacctccaaggtgttcctcccttcaagccccaatcatg
ctgctctctggacatgaaggggaagtatactgctgcaagttccaccccaacggatccacc
ttagcatctgcaggatttgatcgactgatattgttgtggaatgtctatggtgactgtgat
aactatgccacactgaaaggacacagtggagcagtgatggaattgcattacaacacagat
ggcagtatgctcttctcagcatccacagataaaactgtggctgtgtgggatagtgaaaca
ggcgagagggttaaaaggctaaagggacatacctcctttgtgaattcctgttatccagcc
aggagaggccctcagcttgtctgcactggcagtgacgatggcacagttaagctttgggac
atccggaagaaagcagccatccagacatttcagaacacgtaccaggtgttagctgtgacc
ttcaatgacacaagtgatcagattatttctggtggaatagacaatgatatcaaggtctgg
gacctgcgccagaacaagctaacctacaccatgagaggccatgcagattcagtgactggc
ctgagtttaagttctgaaggctcttatcttttgtccaatgcaatggacaatacagttcgt
gtctgggatgtccggccatttgcccccaaagagaggtgtgtaaagatatttcaaggaaat
gtgcacaactttgaaaagaaccttctgagatgttcttggtcacctgatggaagcaaaata
gcagctggctcagccgacaggtttgtgtacgtgtgggataccacaagcaggagaatatta
tataagctgcccggccatgctggctctatcaacgaagttgctttccaccctgacgagccc
atcagcctaagggtcacaaactcagatgccagtaggggccagagaggaaaaacaactggt
gaagctgctgcgtttaagacagtgatcggtgggcaatgccacactgttggccactgtact
aacctcaggttttcttcccagggttttcttgggcacacctgtgctattcatctttgcttc
cgaagctcctaa

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