Trachypithecus francoisi (Francois's langur): 117095870
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Entry
117095870 CDS
T07225
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
117095870 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfn04147
]
117095870 (COL18A1)
00535 Proteoglycans [BR:
tfn00535
]
117095870 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
tfn00536
]
117095870 (COL18A1)
Exosome [BR:
tfn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117095870 (COL18A1)
Proteoglycans [BR:
tfn00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117095870 (COL18A1)
Glycosaminoglycan binding proteins [BR:
tfn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117095870 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
117095870
NCBI-ProteinID:
XP_033088520
LinkDB
All DBs
Position
Unknown
AA seq
1757 aa
AA seq
DB search
MAPDPSGCRVLLLLFCCLAAAQADLLNLNWLWFNNKDTSQATTTIPEPQGLLPVQPTADT
TTHVVPQDGSTEPATAPGSPEAPSELLEDSQGTPTSAESPDTPEENIAGVGAKILNVAQG
IRSFVQLWNGTVPTESLAQAETLVVEAPVGPLALPGPSSTPQENGTTRWPSRGTPSSPGA
HTTEAGTLPAPTPSPPSLGRPWAPLTGPSVPPPSSGRASLSSSLGGAPAWGSLQDLDSQG
LSPTAAAPSQQLQHPDIRLRTPLLHPLVTGFLGVHAAPSAFSSGLPGSLSQVAVTTLIGD
SGAWVSHAANSAGLGLANNSALLGADPEVPAGRCLPLPPSLPVCGRLGISRSWLPNHLHH
ESVEQVQAAAWVWGGLLRTHCHPFLAWFFCLLLAPPCGRVPLPAPPPCRQFCEALQDTCW
SHLSGGRLPVACASLPAQEDGYCVFIGPAAESVGEEVGLLQLLGDPPPQQITQTDDPDVG
LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIQPATEGPGVLFAITDAAQAVVSLGVKL
SGVRDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHFALSVEGGYVVLYVDCEEFQR
MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGMIAELKVRRDPQVGPMHCLDEEGDDSD
GASGDFGSGLGDTRELLREEMGTALKPRLPTPPPVTAPPLAGGSNMEDSRSEEIEEPTTV
TSLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGIPGPPGRAGPPGSPCLPGP
PGLPCPVSPLGPVGPALQPVPGPQGPPGLPGRDGTPGRDGEPGDPGEDGKPGNTGPQGFP
GTPGDVGPKGDKGDPGVGARGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG
PRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGK
EGPPGRTGQKGSLGEAGAPGHKGSKGDPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP
PGRGLPAGFDDMEGSGGPFWSTARGAEGPQGPPGLPGLKGDPGVPGLRGAKGEVGANGAP
GFPGLPGREGTAGLQGPKGDRGSQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGAV
LSVPGPEGRPGFAGFPGPAGPKGDLGSKGERGSPGPKGEKGEPGSVFSPDGSTLGPAQKG
AKGEPGFRGPPGPYGRPGYKGDIGFPGRPGRPGMNGLKGEKGEPGDAHLGFGMRGMPGPP
GPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPAGPKGAKGEVGPPGPPGQFPFDFL
QLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPPGYPGIPGPKGESIRG
QPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPG
TMGTSSGVRLWATRQAMLGQIHEVPEGWLIFVAEQEELYVRVRNGFRKVQLEPRTPLPRG
TDNEVAALQPPVVQLHDSNPYPRREYPHPTARPWRADDILASPPRLPEPQPYPGAPHHSS
YVHLRPALPTSPPAHTHRDFQPVLHLVALNSPLPGSMRGIRGADFQCFQQARAVGLAGTF
RAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFAGSEGPLKPGARIFSFDGK
DVLRHPTWPQKSVWHGSDPSGRRLTESYCETWRTESPSVTGQASSLLGGRLLGQNAASCH
HAYIVLCIENSFMTASK
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcggctgccgcgtcctgctgctgctcttctgctgcctggcagct
gcccaggccgacctgctgaacctgaactggctttggttcaataataaggacaccagccaa
gcaactaccacgatccctgagccccaggggctcctgcctgtgcagcccacagcagacacc
accacgcacgtggtcccccaggatggttccacggagccagcaacagcccctggcagccct
gaggcaccctcagagctgctggaggacagccagggcacccccacttctgctgagagcccg
gacacgccagaggagaacattgccggtgtgggagccaagatcctgaacgtggcccagggc
atccggagctttgtccagctgtggaatggcactgtgcccactgagagcttggcccaggcg
gaaacgctggttgtcgaggctcctgtgggccccctcgccctccctgggccttccagcacc
ccccaggagaatgggaccactcggtggcccagccgtggcactcccagctctccgggcgcc
cacacgaccgaggctggcaccctgcctgcacccaccccatcgcctccctccctgggcagg
ccctgggcaccactcacggggccctcagtgccaccaccgtcctcaggtagagcttctctc
tcctcctcgctgggcggggcccctgcctggggaagcctgcaggacctggacagccaagga
ctctcgcccaccgcagccgctcccagccagcagctccaacaccctgacatccgcctgcgc
acaccacttctgcaccccctggtgacgggcttcctgggcgtgcacgcggccccctctgcc
ttctcctctgggctcccgggctcactgtctcaggtcgcagttaccactttaatcggggac
agcggtgcttgggtctcccacgcggccaactctgcggggctgggtcttgctaataactct
gccctgctcggggctgaccctgaggtccctgccggtcgctgcctgcccctgccgccctcc
ctgccggtttgtggccgactgggcatctcgcgctcctggctgcccaaccacctccaccat
gagagcgtcgagcaggtgcaggctgcggcgtgggtgtgggggggcctgctgcggacgcac
tgccaccccttcctcgcctggttcttctgcctgctcctggccccaccgtgcggcagggtc
ccgctgcccgccccgccaccctgccgccagttctgcgaggccctgcaggacacgtgctgg
agccacctgagtgggggccggctgcctgtcgcctgtgcctcgctcccagcccaggaggac
gggtactgtgtgttcattgggccggctgcagagagcgtcggcgaggaggtggggctgctg
cagctccttggggaccctccgccccagcaaatcacccagacggatgaccccgacgtcgga
ctggcctacgtctttgggccagatgccaacagcggccaagtggcccggtaccacttcccc
agcctcttcttccgtgacttctcgctgctgttccacatccagccggccacggagggccca
ggggtgctgtttgccatcaccgacgcagcgcaggcagtggtctcgctgggcgtgaagctc
tctggggtgcgggacgggcaccaggacatctccctgctctacacggagccaggcgcaggc
cagacccacacagccgccagcttccggctccctgccttcgttggccagtggacgcacttc
gcactcagtgtggagggcggctacgtggtcctctacgtggactgtgaggagttccagaga
atgccgcttgctcggtcctcacggggtctggagctagagcctggcgccgggctcttcgtg
gcacaggcaggaggagcggaccctgacaagttccaggggatgatcgctgagctgaaggtg
cgcagggacccccaggtgggccccatgcactgcctggacgaggaaggcgatgactcagat
ggggcatccggagactttggcagcgggctcggggacacccgggagcttctcagggaggag
atgggcacagccctaaaacccaggctccccacgccacccccagtcactgctccacccttg
gctggaggcagcaacatggaagattccagaagtgaagaaatcgaggagccgaccacggtg
acttcattaggagctcagacacttcctggctcagattctgtctccacgtgggacgggagt
gtccggacccctgggggccgcgtgaaagagggcggcctgaaggggcagaaaggggagcca
ggtattccaggcccgcctggccgggcaggccccccaggctccccctgcctgccgggtccc
ccgggtctcccgtgcccggtcagtcccctgggtcctgtaggcccagcgttgcaacctgtc
cctggaccacaaggacctccagggctgccagggagggatggcacccctggaagggacggc
gagccgggtgaccctggtgaagacggaaagccgggcaacaccgggccgcagggctttccc
gggactccaggggacgtgggccccaagggtgacaagggagaccccggggttggagcgaga
gggcccccaggaccccaagggcctccggggcccccaggaccctccttcagacatgacaaa
ctgaccttcattgatatggagggatctggcttcggtggcgatctggaggccctgcggggt
cctcgaggcttccccggaccccccggaccccccggtgtcccaggcctgcccggcgagcca
ggccgctttggggtgaacagttctgacgtcccaggacccgccggccttcctggtgtgcct
gggcgtgagggtccccctgggtttcccggcctcccgggacccccaggccctccaggaaaa
gagggacccccaggaaggacggggcagaaaggcagcctgggtgaagcaggcgccccagga
cataaggggagcaagggagaccccggtcctgctggcgctcgcggagagagtggcctggca
ggagcccctggacctgctggaccaccaggcccccctggcccccctgggccccctgggcca
ccaggacgaggactccccgctggatttgatgacatggaaggctccggggggcccttctgg
tcaacagcccgaggcgctgaggggccacagggaccccccggcctgccaggactgaaggga
gatcctggcgtgcctgggctgcggggagccaagggagaagttggagcaaacggagccccc
gggttccccggcctccctggcagagagggcactgctgggctccaggggccaaagggagac
agaggcagccagggagaaaagggagatccaggaaaggacggagtcgggcagccaggcctc
cccggaccccctggacccccggggcctgtggtctacgtgtcggagcaggatggtgccgtc
ctgagcgtgccgggacctgagggccggccgggtttcgcaggctttcccggacctgcagga
cccaagggcgacctgggctctaagggcgaacgaggctccccgggacccaagggtgagaag
ggtgaaccgggcagcgtcttcagccccgatggcagtaccctgggccctgcccagaaagga
gccaagggagagccgggcttccgaggacccccgggtccgtacggacggccgggctacaag
ggcgacattggcttccctggacggccgggtcgccccgggatgaatggattgaaaggagag
aaaggggagccgggagatgcccaccttggatttggcatgaggggaatgcccggcccccca
gggcctccagggcccccaggccctccagggactcctgtttacgacagcaatgtgtttgct
gagtccagccgccccgggcctccaggattgccagggaatcagggccctgcaggacccaag
ggcgccaaaggagaagtgggcccccccggaccaccagggcagtttccattcgactttctt
cagttggaggctgaaatgaagggggagaagggagaccgaggtgatgcaggacagaaaggc
gaaaggggtgagcccgggggcggcggcttttttggctccagcctgccaggcccccccggc
cccccaggcccacctggctaccctgggattccaggtcccaagggagagagcatccggggc
cagcctggcccacctggacctcagggaccccccggcatcggctacgaggggcgccagggc
cctcccggccccccaggcccccctggccccccagggcccccttcatttcccggccctcac
aggcagactatcagcgttcctggccctccgggcccccctgggccccctgggccccctgga
accatgggcacctcctcaggggtgaggctctgggccacgcgccaggccatgttgggccag
atacacgaggttcccgagggttggctcatcttcgtggccgagcaggaggagctctacgtc
cgcgtgcggaatgggttccggaaggtccagctggagccccggacgccacttccacgaggg
acggacaacgaagtggctgccttgcagccccccgtggtgcagctgcacgacagcaacccc
tacccccggcgggagtacccccaccccaccgcaaggccctggcgggcagatgacatcctg
gccagcccccctcgcctgcccgagccccagccctaccctggagccccgcaccacagctcc
tacgtgcacctgaggccggcgctccccacgagcccacccgcccacacccaccgcgacttc
cagcccgtgctccacctggttgcactcaacagcccactgccgggcagcatgcggggcatc
cgcggggccgacttccagtgcttccagcaggcgcgggctgtggggctggcgggcaccttc
cgcgccttcctgtcctcgcggctgcaggacctgtacagcatcgtgcgccgtgccgaccgc
gcagctgtgcccatcgtcaacctcaaggatgagctgctgtttcccagctgggaggctttg
ttcgcaggctctgagggtccgctgaagcccggggcacgcatcttctcctttgacggcaag
gatgtcctgaggcaccccacctggccccagaagagcgtgtggcatggctcggaccccagc
gggcgcaggctgactgagagctactgcgagacgtggcggacagagtctccctcggtcaca
ggtcaggcctcctccctgctggggggcaggctcctagggcagaatgccgcaagctgccac
cacgcctatatcgtcctctgcatcgagaacagcttcatgactgcctccaagtag
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integrated database retrieval system
