Trachypithecus francoisi (Francois's langur): 117096551
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Entry
117096551 CDS
T07225
Symbol
RTCB
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfn03016
]
117096551 (RTCB)
Enzymes [BR:
tfn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
117096551 (RTCB)
Transfer RNA biogenesis [BR:
tfn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
117096551 (RTCB)
Prokaryotic type
tRNA splicing ligases
117096551 (RTCB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
117096551
NCBI-ProteinID:
XP_033089851
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSRSYNDELQLLEKISKNCWRVKKGFVPNMQVEGVSYVNDALEKLMFEELRNAHRGGGVG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDSEAVVSPGGVGFDI
NCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGXKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNE
YAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS
PEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQ
HVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMT
ETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADTGIAIRVASPKLVMEEAPESYKNVTD
VVNTCHDAGISKKAIKLRPIAVIKG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagctataatgatgagctgcagctcttggaaaagatcagtaaaaactgctgg
agggtcaagaagggcttcgtgcccaacatgcaggttgaaggcgtttcctacgtgaatgat
gctctggagaaactgatgtttgaggaattaaggaatgcccatcgaggtggtggtgttggt
ggcttcttgccagccatgaaacagatcggcaacgtggcagccctgcctggaattgttcat
cgatctattgggcttcctgatgtccattcaggatatggatttgctattgggaacatggca
gcctttgatatgaatgactctgaagcagtggtatccccaggtggtgtcgggtttgacatc
aactgtggtgtccgcttgctaagaaccaatttagatgaaagtgatgtccagcctgtgaag
gagcaacttgcccaagctatgtttgaccacattcctgttggggtgggatgaaaaggtgtc
atcccaatgaatgccaaagacttggaggaggccttggagatgggggtggactggtcctta
agagaagggtatgcctgggctgaagacaaggagcactgcgaggagtacggaaggatgctg
caagctgaccccaataaggtttctgcaagagctaagaaaagaggccttcctcagttgggg
accctgggagcaggcaaccattatgcagaaatccaggttgtggatgagattttcaatgag
tacgctgctaaaaaaatgggcatcgaccataagggacaggtgtgtgtgatgatccacagt
ggaagcagaggcttgggccaccaagtagccacagatgcactggtagctatggagaaggcc
atgaagagagacaagattatagttaatgatcggcagttggcttgtgctcggatcgcttcg
ccagaaggtcaggactacctgaagggaatggcagcggctgggaactatgcctgggtcaac
cggtcttccatgaccttcttaacccgtcaggcttttgccaaggtcttcaacacaacccct
gatgacttggacctgcacgtgatctatgatgtttctcacaacattgccaaagtggagcag
catgtagtggacgggaaggagcggacactgttagtacacaggaagggatccacccgcgct
ttccctcctcaccatcccctcattgctgttgattaccaactcactggacaaccagtgctc
attggtggcaccatgggaacctgtagttatgttcttactggcactgaacagggcatgact
gagacctttggaacaacctgtcatggagcgggccgtgcattgtcccgagcaaaatctcga
cgtaatttagatttccaggatgttttagacaaattggcagatacgggaattgcaatccgt
gttgcctcacccaaactggttatggaagaggctcctgagtcctataagaatgtgacagat
gtggtgaatacctgccatgatgctggaatcagcaagaaagccattaaactgagaccaatt
gctgtgatcaaaggatag
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integrated database retrieval system
