Trachypithecus francoisi (Francois's langur): 117096908
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Entry
117096908 CDS
T07225
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn04120
Ubiquitin mediated proteolysis
tfn04137
Mitophagy - animal
tfn04141
Protein processing in endoplasmic reticulum
tfn05012
Parkinson disease
tfn05014
Amyotrophic lateral sclerosis
tfn05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117096908 (PRKN)
04120 Ubiquitin mediated proteolysis
117096908 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117096908 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
117096908 (PRKN)
05014 Amyotrophic lateral sclerosis
117096908 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
117096908 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfn04131
]
117096908 (PRKN)
04121 Ubiquitin system [BR:
tfn04121
]
117096908 (PRKN)
03029 Mitochondrial biogenesis [BR:
tfn03029
]
117096908 (PRKN)
Enzymes [BR:
tfn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117096908 (PRKN)
Membrane trafficking [BR:
tfn04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
117096908 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
117096908 (PRKN)
Xenophagy
Other xenophagy associated proteins
117096908 (PRKN)
Ubiquitin system [BR:
tfn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117096908 (PRKN)
Mitochondrial biogenesis [BR:
tfn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117096908 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Rad60-SLD_2
Dsc3_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
117096908
NCBI-ProteinID:
XP_033090163
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPTDQLRVIFAGKELRNDWTVQNCD
LDQQSIVHIVQRPWRKGQEMNATGGDNPRNTAGGCEREPQSLTRVDLSSSVLPGDSVGLA
VILHTDSRNDSPPAGSPADRPIYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLILTQGP
SCWDDVLIPNRMNGECQSPNCPGTTAEFFFKCGAHPTSDKETSVALHLIATNSRNITCIT
CTDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKE
LHHFRILGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGC
GFAFCRECKEAYHEGECSALFEASGTTTQAYRVDERAAEQARWEEASKETIKKTTKPCPR
CHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRVCMGDHWFDV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagtggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccgactgaccag
ttgcgtgtgattttcgcagggaaggagctgaggaatgactggactgtgcagaactgtgac
ctggatcagcagagcatcgttcacattgttcagagaccatggagaaaaggtcaagaaatg
aatgcaactggaggcgacaaccccagaaacacggcgggaggctgtgagcgggagccccag
agcttgactcgggtggacctcagcagctcagtcctcccaggagactctgtggggctggct
gtcattctgcacactgacagcaggaatgactcaccaccagctggcagtccagcagataga
ccaatctacaacagcttttatgtgtattgcaaaggcccctgtcaaagagtgcagccggga
aaactcagggtacagtgcagcacctgcagacaagcaacgctcatcttgacccagggtcca
tcttgctgggatgatgttttaattccaaaccggatgaatggtgaatgccagtccccaaac
tgccctgggactactgcagaatttttctttaaatgtggagcacaccccacctctgacaag
gaaacatcagtagctttgcacctgatcgcaacaaatagtcggaacatcacttgcattacg
tgtaccgacgtcaggagccccgtcctggttttccagtgcaactcccgccacgtgatttgc
ttagactgtttccacttatactgtgtgacaagactcaatgatcggcagtttgttcatgac
cctcaacttggctactccctgccttgtgtggctggctgtcccaactccttgattaaagag
ctccatcacttcaggattctgggagaagagcagtacaaccgataccagcagtatggtgca
gaggagtgtgtcctgcagatggggggcgtgttatgcccccgccctggctgtggagcgggg
ctgctgccggagcctgaccagaggaaagtcacctgcgaaggcggcaacggcctgggctgt
gggtttgccttctgccgggagtgtaaagaagcgtaccatgaaggggagtgcagtgcccta
tttgaagcctcaggaacaactactcaggcctacagagttgatgaaagagccgcagagcag
gctcgttgggaagaagcctccaaagaaaccatcaagaaaaccaccaagccctgtccccgc
tgccatgtaccagtggaaaaaaatggaggctgcatgcacatgaagtgtccgcagccccag
tgcaggctcgagtggtgctggaactgtggctgcgagtggaaccgcgtctgcatgggggac
cactggttcgacgtgtag
DBGET
integrated database retrieval system
