Trachypithecus francoisi (Francois's langur): 117096924
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Entry
117096924 CDS
T07225
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117096924 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfn03019
]
117096924 (PNLDC1)
Enzymes [BR:
tfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
117096924 (PNLDC1)
Messenger RNA biogenesis [BR:
tfn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117096924 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
117096924
NCBI-ProteinID:
XP_033090182
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDVGADEFEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSDWYLKTRQS
VQQFTVCQIGLSVFSAIEGEANKYIAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
NYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSSPDKDQIKAVIDKVTRWLDLAKEGDW
MTLPGIAGFQAFEVQLVLRQALPDIWTVLRDEGVVVKKVSKQHRWYLQNTSCDRESCWKE
NILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPV
LIDTKNVTKDIWKEMNFPRVSNLSEVYEVLNSDLNPTKNSGPEIVHASRCEKYVKTKCPH
EAAYDAFLCGSVLLKVAHLLLQKIHGIDPVPESSFPQYLDVLAPYVNQVNLIRARVPKIN
FSGPDYPSIRPPILILSIKRWPGVSEQQVYHKFQNLCKFDVRRLTRSQFLLLTNKFKDAR
NVLKEYRGHPTLCISLYRYWRHSPDVNCVLQVCGIVTAWALLAFIFGRSGP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaggcgccgacgagttcgaggagagcctgcctctgctgcaggagctcgtccag
gaggcggacttcgtgggtctggacatagagttcacgggccttcgatctaacctgtctgga
ccccagcagatcagtctttttgatttgccatcggactggtacctaaagacccgtcagagt
gttcagcaatttacagtctgtcagattggattgtctgtgttttccgctattgaaggagag
gcaaacaagtatatagcccattcgtgtaacttttttctcttccctacaacgtttgggatt
ttggactcagaattctctttccaggcttccagtgttcagtttttgaatcagtatggcttc
aattataacaagtttctcaaaaacggaatcccatatatgaatgaagaacaggagaagaaa
attcgacacgatatcctgactgggaactggagagttcgcagctctccggataaagaccaa
atcaaggcggtgattgacaaagtgacacggtggctggacctggccaaggaaggtgactgg
atgactcttcctgggatcgctggcttccaggcctttgaggtccagctggtgctgaggcag
gccctccccgacatctggacggtgctgagagatgagggggtggtagtgaagaaagtgagt
aaacaacatcgttggtatcttcagaacacttcttgtgaccgagagagctgttggaaggaa
aatattcttctctctgcaaggggtttttctgtctttttccaaatgctggtgaaagcccag
aagcccttagtgggacataatatgatgatggacctgctgcacctccatgagaagttcttc
agacccctcccagaaagctacgatcaatttaagcagaatatccacagcctatttcctgtt
ctcattgataccaagaatgtaacaaaggatatctggaaggagatgaatttcccgagggta
tcgaatctttccgaagtctatgaagtcctgaacagtgacttgaatcccaccaagaattct
ggaccagagattgttcacgcaagcaggtgtgagaaatacgttaagacaaagtgcccccac
gaagctgcgtatgatgccttcctttgtggctcagttcttttgaaagtggcacacttgctt
ctacagaagatacatggcatcgaccccgtgcctgagtcgtcctttcctcagtacctcgac
gtgctggctccttacgtgaaccaagtgaacctcatccgcgcgcgggtcccgaagatcaat
ttttctggtccagattatcccagtatccgacctcccatcctcatcctcagcatcaaaagg
tggcccggggtcagcgagcagcaagtctaccataagtttcagaatctctgcaagtttgat
gtcaggcgactcacaagaagccagttcttacttctgaccaacaagtttaaggacgcgcgg
aacgtcctgaaggagtaccggggccacccgaccctctgcatctccctgtaccgctactgg
aggcactccccagacgtcaactgcgtgctccaagtctgtggcatagtgactgcctgggcc
cttctcgcgttcatcttcggaagatctggtccctga
DBGET
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