Trachypithecus francoisi (Francois's langur): 117097631
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Entry
117097631 CDS
T07225
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Pathway
tfn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117097631 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfn03019
]
117097631 (PARN)
Enzymes [BR:
tfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
117097631 (PARN)
Messenger RNA biogenesis [BR:
tfn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117097631 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
T6PP_C
RRM_1
RhaA
Motif
Other DBs
NCBI-GeneID:
117097631
NCBI-ProteinID:
XP_033091574
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLNLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVKIAVNTSKYAESYRIQTYAEYMGKKQEEKQIKRKWTEDGWKEADSKRLN
PQCIPYALQNHYYRNNSFTAPSTVGKRNLSPSQEEAGLEDGASGEISDAELEQTDSCAEP
LSEGRKKAKKLKRMKKELSPAGSISMNSPATLFEVPDTW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtt
tctgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctatttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacgaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tcaccagatgtcaaatttgtttgtcagagctccagcattgactttctagcaagccaggga
tttgattttaataaagtttttcgcaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgttcacaggcgaatggtgcaggagctctgtcc
tacgtatctcctaacacttcaaaatgtcctgtcacgattcctgaggatcaaaagaaattt
attgaccaagtggtagagaaaatagaagatttattacaaagtgaagaaaacaagaacttg
aatttagagccatgtaccgggttccaaagaaaactaatttatcagactttgagctggaag
tatccgaaaggcattcatgttgagactttagaaactgaaaagaaggagcgatacatagtt
atcagcaaagtagatgaagaagagcgcaaaagaagagagcagcagaaacatgccaaagaa
caggaggagctgaatgatgctgtgggattttctagagtcattcatgccattgctaattcg
ggaaaacttgttattggacacaatatgctcttggacgtcatgcacacagttcatcagttc
tactgccctctgcctgcggacttaagtgagtttaaagagatgacaacatgtgttttcccc
agactcttggatactaagttgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattagaaaaacgtttaaaagagacacctttcaaccctcctaaagtt
gaaagtgccgaaggttttccaagttatgacacagcctctgaacaactccatgaggcaggc
tacgatgcctacatcacagggctgtgcttcatctccatggccaattacctaggttctttt
ctcagccctccaaaaattcatgtgtctgccagatcaaaactcattgaacctttttttaac
aagttatttcttatgagggtcatggatatcccctatctaaacttggaaggaccagacttg
cagcctaaacgtgatcatgttctccatgtgacgttccccaaagaatggaagaccagcgac
ctttaccagcttttcagtgcctttggtaacattcagatatcctggattgatgacacatca
gcatttgtttcccttagccagcccgagcaagtaaagattgctgtcaataccagcaaatat
gcagaaagctatcggattcaaacctatgctgaatatatggggaaaaaacaggaagagaag
cagatcaaaagaaagtggactgaagatggctggaaggaggctgacagcaaacggttaaac
ccccagtgcataccctacgccctgcagaatcactattaccgcaacaatagttttacagct
cccagcacagtaggaaagagaaatttgagtcctagtcaagaggaagctggcctggaggat
ggagcgtccggggagatttccgacgctgagcttgagcagactgactcctgtgcagagccc
ctctcagagggaaggaaaaaggccaagaaattaaaaagaatgaagaaggagctttctcca
gcaggaagcatctcgatgaacagccctgccacactctttgaagttcctgacacatggtaa
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