Tannerella forsythia: BFO_0160
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Entry
BFO_0160 CDS
T01682
Name
(GenBank) Sigma-54 interaction domain protein
Organism
tfo
Tannerella forsythia
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
Mg_chelatase
AAA_5
AAA
AAA_2
MCM
HTH_28
AAA_19
HTH_50
Phage_CP76
HTH_22
HTH_30
AAA_16
AAA_22
AAA_7
AAA_30
Tudor_4
TniB
P-loop_TraG
HTH_11
DUF2089
Motif
Other DBs
NCBI-ProteinID:
AEW21609
UniProt:
G8UIA7
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Position
187470..188828
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AA seq
452 aa
AA seq
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MNKTKRQGTILVVDDNKGILAAVELLLRPQFARVITTSAPDRIRTILHDEPVDVVLLDMN
FSAGINSGNEGLFWLSRIKKIDASVQVVLFTAYADIELAVRGIKEGASDFVVKPWDNDKL
TEALQTALRARTLQDKRIAATSTAETSRMFWGDCEAMQQLRMLTEKVAYTDANILITGEN
GTGKEMIAREIHRLSARNRHPMVAVDMGAVTETLFESELFGHVKGAFTGAHSDRPGKFEA
ADNGTLFLDEIGNLSYHLQAKLLTALQQRSIVRVGSNTPIPVNIRLLCATNRDLDTMVRK
ELFREDLLYRINTIHLHIPPLRERTDDIAPLAHIFLRKQAQLYGKPELILTPAACDKLKA
QPWYGNIRELEHAIEKAVIISDGKMLDAEDFDFPSAAPPSESPPNDATTLEEMECRMIRR
TMDKHRGNLSLVASELGISRQTLYNKIKRYGL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacgaaacgacaaggtaccattctcgtggtcgacgacaacaagggcatcctt
gcggccgtggaattgctgctgcgaccacagtttgcccgggtaatcacaacctccgcgccc
gaccgcatccgaacgattctgcacgacgaaccggtggatgtggtattgctcgatatgaac
ttcagtgcagggatcaacagcgggaatgaaggtcttttctggctctcccggatcaagaag
atcgacgcctcggtacaggttgtactctttacggcatacgccgatatcgaactggccgtg
cgaggcatcaaagaaggcgcttcggacttcgttgtcaaaccctgggacaacgacaaactg
accgaagccttgcagacggctctccgggcccgcacgctgcaagacaaacgaatagcggcc
acctccaccgccgagacaagccgcatgttttggggcgactgcgaagcgatgcagcaactg
cgcatgctcacggaaaaagtggcgtataccgatgccaatattctgatcacgggcgagaac
ggcacgggaaaagaaatgattgcacgcgagattcaccggctgtcggcacgtaatcgtcat
ccgatggtggccgtcgatatgggcgccgttaccgaaacactctttgaaagcgagcttttc
ggccatgtcaaaggcgcattcaccggcgctcactccgaccgtcccggcaagtttgaagca
gccgataacggtacgctctttctcgacgagatcggcaacctctcctatcatttgcaggcc
aagctgctcacagccctgcaacagcgcagcatcgtgcgcgtcggaagcaatacgcccata
ccggtcaatattcgcctcctgtgcgccacgaaccgcgacctcgacaccatggtcagaaaa
gaacttttccgggaagacctgctctatcgcatcaacaccattcacctgcatatcccgccg
ctgcgcgaacggacggacgacatcgcgccgctggcacatatctttctccgtaaacaggca
cagttgtacggcaaaccggaactgatcctcacgcctgccgcgtgtgacaaactgaaggcg
caaccctggtacggcaatatccgcgaacttgaacatgccatcgagaaagccgttatcatc
agcgacggaaagatgctcgatgcggaggatttcgattttccgtccgccgcccctccgtcc
gaatctccgccgaacgatgcgaccacactcgaagagatggagtgccgcatgattcgccgc
acgatggataagcaccgcggcaatctctcgctcgtggcttccgaactcggcatctcgcga
cagacgctctacaataaaatcaaacgttacggactctga
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