Tannerella forsythia: BFO_0989
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Entry
BFO_0989 CDS
T01682
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tfo
Tannerella forsythia
Brite
KEGG Orthology (KO) [BR:
tfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfo03400
]
BFO_0989 (sbcD)
DNA repair and recombination proteins [BR:
tfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFO_0989 (sbcD)
Archaeal homologous recombinant proteins
BFO_0989 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
TPR_10
Metallophos_2
TPR_12
Motif
Other DBs
NCBI-ProteinID:
AEW19893
UniProt:
G8UQ18
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All DBs
Position
1069925..1071133
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AA seq
402 aa
AA seq
DB search
MSGKRQIRIIHTADWHLGQHFFEYDRRTEHARFLAWLKNVLKDRQVDVLLIAGDVFDSPN
PSADSQKMYYTFLREVTHENPELQMIIIAGNHDSAARLEAPSPLFEEMHIDVRGTVRRTP
EGDIDYARLIVPLKKGGSCLAVPYLRQGDYPDAENYSQAVRTMYEKLYDLVPDKHLPVIA
MGHLQATGSEISENDRSERTVIGGLECVSPDAFGPGITYTALGHLHRAQRVSGRENVRYA
GAPIPMSFAEKNNRQGVVFIEIDDTVKIEHIEFEDTVRLITLPREARALPEVLEEIGRLP
AGEADEHSPYLEIKIRITEPEPSLRHQIEEALKDKSVRLTRIEAVTAARKDSDLLSGPED
LQTIDPMDLAMNVFKRQYGDEPMPEAMQKLLRQTLREVEGSL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggaaacggcagattcggatcattcacactgcagactggcacctcggacaacat
ttctttgaatacgaccgccggactgaacacgcacgtttcctggcatggctcaaaaacgtg
ctgaaagaccgacaagttgacgtgctgctgattgcgggcgatgtgttcgacagtccgaac
ccgtcggccgactcgcaaaagatgtactatacatttctgcgcgaagtaacgcacgaaaat
cccgaactgcagatgatcatcattgccggaaaccacgactcggcagcacgtcttgaggct
cccagcccattgttcgaggagatgcatatcgatgtgcgcggcacggtgcgacggacgccg
gaaggcgacatcgattatgcccgtctgatcgtaccactcaaaaaaggaggatcttgcctt
gccgtgccctacctgcggcaaggcgactatcccgatgcggaaaattattcgcaggctgtg
cggacgatgtacgaaaagctgtatgatctcgtccctgataaacatcttccggtgattgcc
atgggacatttacaggcgaccggttcggagatttcggaaaatgaccgttcggaacgcacc
gtcatcggagggttggaatgcgtctctcccgatgctttcggccccggaataacatatacc
gcattgggtcacctgcatcgcgcccagcgtgtttccggacgcgaaaatgtgcgttatgcg
ggcgctccgattcccatgtcgttcgctgaaaagaacaacagacaaggggtcgtttttatc
gagatagacgatacagtcaagatcgaacacatcgagttcgaagatacggtcaggctgatc
acccttcctcgcgaagcccgcgctttgcccgaagtactggaagagatcgggcggttaccg
gcaggagaagcggacgaacattctccctatctggaaatcaagatacggatcacggaaccg
gagccttcccttcggcaccagatcgaagaggcactgaaagacaagtccgtccgactgaca
cgcatcgaagccgtaacggccgcgcgaaaagatagcgaccttctttccggcccggaagat
ttgcagactatcgatccgatggatctggccatgaacgtctttaaacgtcaatatggcgat
gaaccgatgcctgaagccatgcagaaacttttgcgacagaccctccgagaagtcgaagga
tcgctctaa
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