Tannerella forsythia: BFO_0990
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Entry
BFO_0990 CDS
T01682
Name
(GenBank) putative nuclease sbcCD, subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tfo
Tannerella forsythia
Brite
KEGG Orthology (KO) [BR:
tfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfo03400
]
BFO_0990
DNA repair and recombination proteins [BR:
tfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFO_0990
Archaeal homologous recombinant proteins
BFO_0990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_22
ABC_tran
nSTAND3
ABC_ATPase
FtsK_SpoIIIE
DUF87
IL3
RsgA_GTPase
MeaB
cobW
Motif
Other DBs
NCBI-ProteinID:
AEW21953
UniProt:
G8UQ19
LinkDB
All DBs
Position
1071196..1074291
Genome browser
AA seq
1031 aa
AA seq
DB search
MKILAIRGKNLASLEKAFEIDFTAEPLKSAGIFAITGSTGSGKSTLLDALCLALFDQTPR
TSHASENILIRDVGDKTLSQRDCRNILRRGTSEGYAEVDFVSLSRETFRARWSVKRAYNK
AEGSMQSSEIRLRNLSTGHEEPGRKTELLARIVDLIGLTFDQFTRSVLLAQGDFATFLKA
RQPEKAELLEKLTGTDIYSRLSIAIYEKSKNAGAELEAVTRHIESIERLSEEQRRAYETE
KSEVTHELTELKKTIDRLTAQLKWQTEHTRLCDEQKQAEHRLAQARQAIAEARERYDYIV
QIDRVQEIRDTFKHLENLRHTLSESQADLQTAVRRQAENEPLLTEAIHAVTDCEQEQTQL
MDKQQQIAPQIVRARELDVLISKAKKDLEEVRRELKDAQERKVKTEEDIRCIQETLAQTQ
TELITREEWFKTHRDFELIAARMDLLLSLIAEAQTVHKQKQRNEQTLERSKQILSDREKK
MERLRQEAERLNKMMPAEIATLRAQLKEGMPCPVCGSLHHPVASLAETQRMKEQELEQAK
ADNARQTEEVTSDLEIRKDEITKLSALIENYTAQYTATYRKLEEHLITLPGWQTFFERAT
LAEHLITRKTEWDNASTALTEAQEQLKRLKIDLENGRVRIQETDRIWKVTTGKNEHCRNI
LEQWQAERQTVLRGKPADAAEKYFTDNLSLITSKIKKLNEKRNLLSAEQKSLSDHIAQRR
QDLAKFVAEEETLQKAVETWMAGKDGITRERLPELLSKSNAWIQAEKKALNSLTEAETTA
RATLAERNKNLTLHYESNDRPTDQNTTNEALQACLQERKLQTEERTRRQTELEVVLTTNA
RNEKQVETLEKERQAKYTHAENWQKLNTLLGSASGNKFKEIAQGYTLDTLLGYANRHLRE
LTSRYKLQRVPGSLALQVVDLDMLNEVRTVHSLSGGESFLISLALALGLSSLSSNRMNVE
SLFIDEGFGSLDNDTLGVAMDALERLQTQGRKIGVISHVSEMTERIAVRISLTKTSNGKS
EIKIRATEPKG
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggctatccgagggaaaaatctggcctcactcgaaaaagctttcgaaatc
gatttcaccgcagaaccgctcaaatcggccggtatttttgccattacgggaagtaccgga
tcgggtaagtctaccctgctcgacgccttatgtctggcgttgttcgaccagacgccacgc
acgagccatgcctcagaaaatatcctgatccgcgacgtgggcgacaagactctcagtcaa
cgcgattgtcgtaatatcctgcgccgtggtacgagcgaaggctatgccgaagtcgatttc
gtatcgctcagccgagagacatttcgggcacgttggtcggtcaaacgggcttataacaag
gccgaaggatcgatgcaaagcagtgagatacgcctccgcaatttatccacaggacatgaa
gagccgggacgaaagacggaactgctcgcacgcatcgtcgatctgatcgggcttacgttc
gatcagtttacccgttcggtgttgttggcacaaggcgatttcgccacattcctcaaagcg
cgtcagccggagaaggctgagctgctcgagaaattgacgggcacggatatctattcgcgc
ctctcgatcgccatttatgagaagtcaaagaacgccggcgcggagctggaagccgtcacg
cggcacattgaaagtatcgaacgactttcggaagagcaacgaagggcgtatgagacggaa
aagtcggaggtaacacacgaactgacggaactgaaaaagacgatcgaccgattgacggca
cagctgaaatggcagaccgaacacacccgtttgtgcgacgaacaaaaacaggccgaacat
cgtctggcgcaagcccggcaagccatcgcggaagcacgtgagcgttacgactacatcgtg
caaatcgaccgtgtacaggagatacgtgacacattcaaacatctggaaaacctccgccac
acattgtccgagtcacaggccgatctgcaaacagccgtccgccgacaagccgaaaacgag
ccgttgcttaccgaagccatacacgccgtaaccgactgtgagcaggaacaaacgcagctc
atggataagcaacagcagattgcccctcaaatcgtccgcgcccgcgaattggatgtctta
atttcaaaggcgaagaaagaccttgaagaggtccgaagagagcttaaagatgctcaagaa
agaaaagtaaaaaccgaagaggacatccgctgcatacaggagacgctggcacagacgcaa
acagaactcatcacacgagaggaatggtttaaaacgcatcgcgactttgagctgatcgcc
gcacgaatggatctccttctctccctgattgccgaagcgcagaccgtacacaagcaaaag
caacgtaacgaacaaacattggagagaagtaagcaaatcctgtccgaccgggagaagaaa
atggaacgactcaggcaggaggcggaacggctgaacaagatgatgcctgccgaaatcgcg
acgctccgcgcacagctgaaggaagggatgccttgtccggtgtgcggcagcctccatcac
ccggttgcaagtctcgcagagacgcaacgtatgaaagaacaggagctggaacaggcgaag
gctgacaatgcccggcaaacggaggaggtcaccagtgatctcgaaatacgcaaagatgag
atcacgaaactttccgcactgatcgagaattacacggcgcagtatacggccacataccgc
aagttagaggaacatctcatcactctccccggctggcaaacctttttcgaacgtgctaca
ctggccgaacacctgatcacccgcaagacggagtgggacaatgcaagcacagccctgacc
gaagcgcaggaacaactcaaacgactcaaaatcgatcttgagaacgggcgggtgcgcata
caggagaccgaccgaatatggaaagtcacgaccgggaagaatgaacactgtcggaacata
ttggaacaatggcaggccgaacgacaaactgtgctgcgcgggaaaccggccgatgctgcc
gagaaatactttaccgacaacttgtctcttatcacatcgaaaataaaaaaactgaatgag
aaaagaaacctgctgtcggccgagcagaaaagcctgagcgatcacatcgcccaacgccgg
caagacttggctaagttcgttgccgaagaggaaacgctacaaaaagccgtcgaaacatgg
atggccggaaaagatggcatcacccgcgaacgcctcccggagctgctctcgaaaagtaat
gcgtggattcaggctgaaaaaaaggcgctgaactccctgactgaagctgagacaaccgcc
cgcgccaccttagccgaacgaaataagaacctgacattgcattacgagtccaatgaccgg
ccgacagatcagaacaccacgaacgaagcgctgcaagcctgtctgcaagagagaaagctg
cagaccgaagaacgtacccggcgacagaccgaactcgaagtagtactgactacaaacgct
cgtaacgaaaagcaggttgaaacattggagaaagaacggcaggcgaaatatacacacgcc
gagaactggcaaaagttgaataccctgctcggatcggcctccggcaataagttcaaagag
atcgctcagggatataccctcgacacgctactcggctacgcgaacaggcatcttcgggaa
ctcacgtcgcgctataagctgcaacgagtacccggatcactcgctctgcaagtcgtcgat
ctcgatatgctcaacgaggtacgcacggtacactcgctctcggggggcgaatcgttcctg
atctcgctcgcacttgccctcggcctctcatccctgtcgtcgaatcgcatgaacgtggag
tccctctttatcgacgaaggattcggatcgctggacaacgacacgctgggtgtcgctatg
gatgcacttgaacgtttacagacccaaggacgcaagatcggcgttatctcacatgtctcg
gagatgaccgaacgcatcgccgtacggatcagcctcacaaaaacatcgaacggaaaaagt
gagatcaagatcagagcaaccgaaccgaaaggttaa
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integrated database retrieval system
