Tannerella forsythia: BFO_1458
Help
Entry
BFO_1458 CDS
T01682
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
tfo
Tannerella forsythia
Pathway
tfo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFO_1458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfo03021
]
BFO_1458
Transcription machinery [BR:
tfo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFO_1458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
Sigma70_r2
GerE
DUF722
HTH_23
HTH_24
HTH_AsnC-type
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AEW20357
UniProt:
G8UL20
LinkDB
All DBs
Position
complement(1565844..1566413)
Genome browser
AA seq
189 aa
AA seq
DB search
MSDEQQIFDYLKEGDEEAFSSLFRKYYRDLVLFAGTILPDRKELCEDIVQNVFTDLWNRR
NERVIKTSIKGFLLQSVRNGCLDELRHDGVVRVHAEYMAFSRIDRHWETEEYILYSDLEN
RLREGLDRLPEEYRNVFVLRHNKGLKNKGIATELHLSERTVEERMAKALKFLRHFLSDFL
FWITFIVYW
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgagcaacagatattcgattatttaaaggaaggggatgaagaagcgttttcg
tctctgttccgtaaatactacagggatctggtgttatttgccggaacaattctccccgat
cggaaggaactttgtgaagatatcgtacagaatgtgttcacggatttgtggaaccggcgt
aacgagagagttattaaaacttccatcaaaggttttttattacaatcggttcggaacggc
tgtttagatgagttgcgacatgacggagtggtcagagtacatgccgaatacatggctttt
tcaagaatagaccgtcattgggaaacagaagaatatatcttatattccgatcttgaaaac
cggctgagagaaggtttggacagactgcctgaagagtaccgtaacgtatttgtattgaga
cacaataaggggttaaaaaataaaggaatagcaacagaattgcatctatcggagagaact
gtcgaggagcgaatggccaaagcattgaaatttctgcgtcattttttgagtgattttctt
ttctggattacttttatagtttattggtaa
DBGET
integrated database retrieval system