Tannerella forsythia: BFO_1641
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Entry
BFO_1641 CDS
T01682
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tfo
Tannerella forsythia
Brite
KEGG Orthology (KO) [BR:
tfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfo03032
]
BFO_1641 (topA)
03400 DNA repair and recombination proteins [BR:
tfo03400
]
BFO_1641 (topA)
Enzymes [BR:
tfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BFO_1641 (topA)
DNA replication proteins [BR:
tfo03032
]
Prokaryotic type
DNA Topoisomerases
BFO_1641 (topA)
DNA repair and recombination proteins [BR:
tfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BFO_1641 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEW22172
UniProt:
G8UMJ9
LinkDB
All DBs
Position
complement(1747317..1749659)
Genome browser
AA seq
780 aa
AA seq
DB search
MQKKLVIVESPAKAKTIEKFLGKDYRVMSSYGHIRDLKTKEFSIDIENDYAPQYVIPAEK
KKLVADLKKASQEATEVLLASDEDREGEAIAWHLAEVLDLNPQNTQRIVFHEITKNAILH
ALDTPRSLDIHLVNAQQARRVLDRIVGFEVSPILWRKVKPALSAGRVQSVAVRLIVERER
EVNDFVAEASYRVIATFILPDGKTLLKAELNRRLKDKDEVDRFLKACREASSEFIIDDIS
KKPLKKSPAPPFTTSTLQQEAARKLGFSVSQTMMVAQRLYESGFITYMRTDSVNLSSLAL
NTAKEAIFREYGEKYHQLRKYHTKSKGAQEAHEAIRPTYMDHPAINGNAQEKKLYDLIYK
RTIASQMADAELERTTISIGIGKMKDKFLATGEVVKFDGFLHVYRESADDEGEGEQENGL
LPAVQVKDVLGVQEITATERFTQRPPRYTEASLVRRMEELGIGRPSTYAPTIQTIQNREY
VVRGDKPGEERSFHAVTLKNGTITEAEKKEIVGADRNKLLPTDIGTVVNDFLMEYFPDIM
DYNFTASVEKEFDAIAEGELVWTKALDKFYRFFHPIVEKTAAVKTEHKVGERQLGIDPKS
GEPVFVKIGRYGPIVQIGLANPNDKQAPKPRFASLMKGQSIETISLEEALELFNLPRVIG
TFEDKEMTAAIGRFGPFVRHDNQFVSIPKTLSPYSITAEEAIALIEEKRNKEAQRYIKKF
EEEPGLEILNGRYGPYITFDKANYRIPKGVEAASLTLEECKKIIAEADEKPAKRKGAKKK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaactggttatcgtagagtctcctgcaaaagcaaaaaccatcgagaaattt
ttgggtaaagactatcgggtcatgtcgagttacggacacatccgcgacttgaagacgaaa
gagttcagtattgatattgagaatgattacgcaccgcaatacgtcattccagcggaaaag
aaaaagctggttgcagacttgaaaaaagcgtcgcaagaggcgacggaggtgctgctcgcg
tctgatgaagaccgcgaaggagaagccattgcctggcatttagccgaagtgctggatctg
aacccccaaaatacgcagcgcatcgtttttcacgagatcacgaagaacgcgatcctgcat
gcgctggatacgcctcgcagcctcgatatccatctggtcaatgctcagcaggcacgccgc
gtattagaccggatcgtaggttttgaggtgtcaccgattttatggcgcaaagtcaagccg
gcgctttcggccggacgggtgcagtcggtagccgtgcgcctgatcgtagagcgtgaacgc
gaagtgaacgacttcgtggccgaagcctcgtaccgggtcatcgctactttcatcctgccc
gacggaaaaacgctcctgaaagcggaactgaacagacgcctgaaagacaaggatgaggtc
gaccggtttctgaaagcatgccgggaagcaagttcggaatttatcatcgacgatatcagt
aaaaagccgctgaaaaaatcgccggctccgcccttcacgacttctacgttgcaacaggaa
gcggcgcgcaagctcggcttctccgtttcgcagacgatgatggttgctcaacgactttac
gaatcgggattcatcacatatatgcgtacggactcggtgaacctgagcagccttgccctg
aatacggccaaggaagcgattttccgcgaatacggggaaaagtatcatcagctacgcaag
tatcacacgaagagcaaaggcgcacaggaagcgcacgaagctattcgtccgacgtatatg
gatcatccggcaatcaacggaaacgcacaggagaaaaaactgtacgacctgatctacaaa
cgtacaatcgccagtcagatggccgatgccgaactggagcgcacgacgatctcgatcggt
atcggaaagatgaaagataaattcctcgctacgggcgaggtggtgaagttcgacggtttt
ctgcatgtctaccgcgagagcgcggacgacgagggagaaggcgagcaggaaaacggactg
ctcccggccgtgcaggtgaaagatgtgctcggcgtgcaggagatcaccgctacggaacgc
ttcacgcagcgtccgccgagatatacggaagccagtttggtgcgccgcatggaagagctg
ggtatcggacgtccgtctacgtacgcaccgacgatccagacgattcaaaaccgcgaatac
gtcgttcggggagataaaccgggcgaagaacgttccttccacgcggtcaccttgaagaat
gggacaatcacggaggcagaaaagaaagagatcgtcggagccgatcgcaacaagttgctt
ccgaccgacatcggcacggtagtcaacgatttcctgatggagtactttccggatattatg
gattacaacttcaccgccagcgtggagaaagaattcgatgccattgccgagggtgagctg
gtctggacgaaagcgctcgataaattctaccggttcttccatccgattgtagaaaaaaca
gccgcggtgaaaacagaacataaggtcggggagcgtcagctcggtatcgacccgaagagc
ggggagccggttttcgtcaaaatcggccgttacggtccgattgttcagatcgggctggcg
aatccgaacgacaagcaagcgcccaagccgcgtttcgcgtcactgatgaaaggtcagtct
atcgaaacgatctcgctcgaagaagcgctggagctttttaatctgccgcgtgtcatcggt
acgtttgaagacaaggagatgacggcagcgatcggccgattcgggccgttcgtgcgtcac
gacaaccaatttgtatccatccccaagacgctaagcccctactccatcacggccgaagag
gcgatcgcgctgattgaggaaaaacggaacaaggaggcgcagcgttacatcaaaaagttc
gaggaagagccgggactggaaattctgaacggacgttacgggccgtacatcacattcgac
aaagccaactaccgtatcccgaaaggcgttgaggccgcgtcgttgacgctcgaagagtgt
aaaaaaatcatcgccgaggccgacgaaaaaccggccaaaagaaaaggcgcaaagaagaaa
taa
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