Tannerella forsythia: BFO_1723
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Entry
BFO_1723 CDS
T01682
Name
(GenBank) putative DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tfo
Tannerella forsythia
Pathway
tfo03030
DNA replication
tfo03430
Mismatch repair
tfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFO_1723
03430 Mismatch repair
BFO_1723
03440 Homologous recombination
BFO_1723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfo03032
]
BFO_1723
03400 DNA repair and recombination proteins [BR:
tfo03400
]
BFO_1723
Enzymes [BR:
tfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFO_1723
DNA replication proteins [BR:
tfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFO_1723
DNA repair and recombination proteins [BR:
tfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFO_1723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
CCDC113_CCDC96_CC
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
AEW20792
UniProt:
G8UN37
LinkDB
All DBs
Position
complement(1834885..1838670)
Genome browser
AA seq
1261 aa
AA seq
DB search
MVPFVHLHVHSQYSLLDGQASIDALIEKAQGDGMPGMALTDHGSMFGIKEFYNKVQKKNS
KHLSIIKDCENELRKLNDKDHPTPEETDRMQKLSEKIHAKKKEVFKPILGCECYCARNGR
FNKTAKEDLGGWHLIVLAKNLKGYKNLIKMVSLSWTEGFYRNPRIDKELLEKYHEGLIIC
SACLGGEIPQLIMRDRKEEAEASVLWFKNLFGDDYYLELQRHETHAPNADQSTYPKQVEV
NKVLVELARKHGIKIIATNDVHFVNEDDAEAHDRLICLSTGKDLDDPARMRYSKQEWMKS
TAEMNSIFADVPEALSNTLEVLDKVELYSIDSPALMPFFEIDPSFGTEEAYREKYTAKDL
MDEFNETDADGKVTDNYLRLGGYEKVIRIKLEADYLEHLTLKRAMSPNRYSENIPEEAKE
RIHFELKTIKRMGFPGYFLIVQDFITAAREMGVSVGPGRGSAAGSVVAYCLGITDIDPIR
YDLLFERFLNPDRISMPDIDIDFDDDGRGEVLKWVTEKYGQQRVAHIITYGTMATKLALK
DVARVQQLPLKESNRLAKLVPDKIPDKKLTLKNAIEAIPELKEAANSTNPILRDTLKYAQ
KLEGNVRNTGVHACGVIIGQQDISDIVPVATAEDKETKETLLVTQYEGSVIEETGLIKMD
FLGLKTLSIIKEAIENIKQTTGKAIDIDKIPINDKRTYDLFCQGKTVATFQFESAGMQKY
LKELQPTEFEDLIAMNALYRPGPMDYIPAFIARKHGREEITYDIPEMERYLKNTYGITVY
QEQVMLLSRLLASFTRGQSDTLRKAMGKKQIDKMNELKSKFLNGGQKNGHNIKTLEKIWS
DWEKFASYAFNKSHATCYSWVAYQTAYLKAHYPSEFMAAVLSRNLSNIKEITKAMDECKA
MKIKVLGPDVNESHRKFGVNTKGDIRFGLVAVKGVGESAVQAIIEERDKRGPYKDIYDFV
ERVNLSACNKKAFESLALAGAFDTLSIPREPLVTPSGKGETFIDVVIRYGMKYQTDKQMS
SASLFGDDHAIQIARPEIPKCEPWSVLERLNREKELIGIYLSAHPLDEYRIILNHVCNMT
MKDVDSREWEEFQNKELLLGGIVTGYREGLTKTGKPYGIIKIEDMSGSGEMPLFGDNYIN
FSKYGKEGLYLYIKAELQPRRWKEAELDFKINSIQLLHDVKDSLIHSLSISIPIDDLNKQ
IISELSTLIKSNPGKTQLFFNVAGSDHVALHFSSRDIRLNVTQELLNFINDSDHLDFTIN
K
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgtttgttcatttacatgtacattcgcagtattcactacttgacggacaagct
tccatcgatgcgttaatcgaaaaggcgcagggcgatggaatgcccggcatggcgcttacc
gatcacggaagcatgtttggcatcaaagaattttacaataaggttcagaagaaaaacagc
aaacatcttagcataattaaagattgcgaaaacgaacttcggaagttaaacgataaagat
catccgacgcctgaagaaacggatcgcatgcaaaaactttcggagaagatacatgcgaaa
aaaaaagaagtctttaaaccaatcttaggttgtgagtgttattgtgcacggaacgggcgt
tttaacaagacggctaaagaagatctcggaggatggcatctgattgttctggcgaagaat
ctgaaaggatacaagaacttaattaagatggtctcgctctcatggacggaagggttttat
cgcaatccgcgcattgataaggagctgcttgaaaaatatcatgaggggctcatcatctgt
tccgcatgccttggaggtgaaatcccgcagttgatcatgcgagatcggaaagaagaggcc
gaagcttcggtgctatggttcaagaacctttttggcgatgattactatctggaattgcaa
cgtcacgaaacgcatgccccaaatgccgaccaaagcacttatccaaagcaagtggaagtc
aataaagtcttggtcgagttggcacgtaagcacggcataaaaatcattgcaacgaatgat
gtgcattttgtgaatgaagacgatgccgaagcgcatgatcgcctgatctgcctcagcacc
ggcaaagacctcgatgatccggcaagaatgcggtattccaaacaggagtggatgaagagt
acggctgagatgaactcgatttttgccgatgtacccgaagccctgagcaatacgcttgaa
gttcttgacaaggtggaactgtattccatcgactcaccggcattgatgcctttcttcgaa
attgatccttcgtttggtacggaagaggcgtatcgcgaaaaatatacggccaaagacttg
atggacgaatttaatgagacggatgccgatggtaaagtaacggataattatctgcgtctc
ggcggttatgagaaggtgatccgtatcaagctggaagcggactacctcgagcatctgacc
cttaaacgggcgatgagcccgaaccgctacagcgaaaacataccggaagaggcgaaggaa
cgtattcatttcgaactgaaaacgattaaaagaatggggttccccggctacttcctgatt
gtacaggatttcatcacagccgcccgggagatgggcgtatccgtcggaccgggacgtggc
tcggccgccggttcggtcgtcgcatactgcttgggaattaccgatatcgatcccatccga
tacgatttactgttcgagcgtttccttaatcccgatcgtatttctatgcctgatatcgat
atcgattttgatgacgacgggcgtggggaggttctgaaatgggtgacggaaaaatacggt
cagcagcgcgtagcgcatatcattacctacggcacgatggcaaccaagctggcgctgaaa
gatgtggcgcgggtgcaacaactgcctctgaaggaatcaaatcgtctggccaagctggta
ccggataaaataccggataagaagctaacgctgaagaatgccattgaggccatacctgag
ttaaaggaggcagccaacagcacgaatcccatcctgcgcgacacgttaaaatatgctcaa
aagctggagggcaatgtgcggaatacaggtgtgcatgcctgcggtgtgattatcggacag
caggatatttccgatatcgtgcctgtggcaacggccgaagacaaggaaacgaaagagact
ttgctcgttacgcagtatgaaggttcggtcattgaggaaacggggctgatcaagatggat
tttcttggcctgaaaacactgtcgatcattaaagaagcgatcgaaaatatcaagcagacg
accggtaaggccattgatattgataagattccgatcaatgacaaacggacttacgatctg
ttctgtcaaggaaagaccgtcgcgacgtttcagttcgagtctgccggcatgcaaaagtat
ctgaaggaattgcaaccgaccgaatttgaagacctgatcgcgatgaatgcgctctatcgt
cccggaccgatggattatattcccgcatttatcgcgcgtaagcatggtcgggaagagatc
acctacgacattcccgagatggagcgttatttgaaaaatacatacggaattaccgtttat
caggaacaagtcatgttgctctcgaggttgctcgccagctttacccgcgggcaaagcgat
acgttgcgtaaggccatgggaaaaaagcagattgacaagatgaatgagctgaagagtaaa
ttccttaacggcggccaaaaaaacgggcataatataaaaacacttgagaaaatctggtct
gactgggagaagtttgcctcgtatgcgttcaacaaaagtcatgcgacatgctattcatgg
gtcgcttatcagacagcgtatctgaaggctcattatccgtcggagtttatggccgccgta
ctgagtcggaacctttcgaatatcaaagaaattacgaaggcgatggacgaatgcaaggcg
atgaagattaaagtgctgggtcctgacgtcaacgagtcgcaccgtaaattcggggtgaat
acgaagggagatatccgtttcggactcgtggccgttaaaggagtgggagaaagtgctgtt
caggcgattatcgaggaacgtgacaagcgcgggccttataaggatatttacgattttgtc
gaacgggttaatctgagtgcatgcaacaagaaagcatttgaaagcttggctctggcaggt
gcattcgataccttgagtataccgcgcgaaccgctcgttactccgagtggaaagggggag
acctttattgacgttgtgatacgttacggaatgaaatatcagacggataaacagatgtcg
tccgcctcgctgttcggtgatgatcatgcgatacagattgcacgtcccgaaatcccgaag
tgtgagccgtggagtgtgctggaacggcttaacagagagaaagaactgattggcatctat
ctgtctgcacatccgctcgatgaataccgcatcatcctgaaccatgtctgcaacatgacg
atgaaggatgtggacagccgcgaatgggaagagtttcagaacaaggaacttttgcttggc
ggtatcgtgacggggtatcgggagggactcacgaagaccgggaagccttacggcatcatc
aagatcgaagatatgtcgggcagcggagagatgccgcttttcggcgacaattatattaat
ttcagcaagtacggcaaggaaggactctatctttatataaaggcggagcttcagccgcga
aggtggaaagaagcagagcttgattttaaaatcaactcgatccaactgttgcatgacgtg
aaagactcgctgattcattcgctcagtatctccattccgatcgacgatttgaacaagcaa
ataatcagcgaactgtccactttaataaaaagtaatccgggcaagacacagttgtttttc
aacgtcgccggaagcgatcatgtggcattgcatttctcgtcgcgtgacatcaggctgaac
gttacgcaagagttgctgaattttatcaacgactcggatcatttagattttacgatcaat
aaataa
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integrated database retrieval system
