Tannerella forsythia: BFO_3004
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Entry
BFO_3004 CDS
T01682
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
tfo
Tannerella forsythia
Pathway
tfo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFO_3004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfo03021
]
BFO_3004
Transcription machinery [BR:
tfo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFO_3004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
HTH_AsnC-type
HTH_40
HTH_38
HTH_30
TCAF_helical
Trp_repressor
DUF722
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AEW20346
UniProt:
G8UPT2
LinkDB
All DBs
Position
3044703..3045308
Genome browser
AA seq
201 aa
AA seq
DB search
MRDDAYIENLFRKIAVHDSREAFKELFFEFYPALCIFAQRYVNDPETSEDIVQETFLKIW
KNRKTIDIRLSFRNFLLTSVRNSCTDYLRKESITTKYTTDQVELPSVSMSPEDFYTLSEL
ETLLRQALEKLSSDVREVFEMNRFNGLTYREIATRLELSPKTIEARMSKALKTLRHELKD
YFPLLLLLCTHIDAMGNLSPG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgatgcatacattgaaaatctattcagaaaaatagccgttcatgacagtcgc
gaggctttcaaggaactgttttttgaattttatcctgctctgtgcatctttgcacaacgt
tacgtaaatgatccggagacttcggaagacatcgtgcaagagacatttctgaaaatctgg
aaaaataggaaaacaatcgatatccggctctcttttcgcaatttcctgcttaccagcgtt
cgtaacagttgcacggattatctgcgcaaagaatcgattacaaccaaatataccaccgat
caagttgagttgccctctgtctccatgtcaccggaagacttctatacgttaagcgaactc
gaaactctcctccgccaagcattggaaaagttatcgagcgatgtccgcgaagtatttgaa
atgaaccgcttcaacggactgacgtatcgcgagatcgccacacggctcgaactctccccg
aagaccatcgaagcccgtatgagcaaagccctgaaaaccttgcgccatgagttgaaagac
tattttccgctgctgcttctgctctgtacgcatatagatgccatggggaatctctctccg
ggataa
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integrated database retrieval system
