Tannerella forsythia: BFO_3356
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Entry
BFO_3356 CDS
T01682
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tfo
Tannerella forsythia
Pathway
tfo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BFO_3356 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfo01007
]
BFO_3356 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfo03016
]
BFO_3356 (lysS)
Enzymes [BR:
tfo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
BFO_3356 (lysS)
Amino acid related enzymes [BR:
tfo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BFO_3356 (lysS)
Transfer RNA biogenesis [BR:
tfo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BFO_3356 (lysS)
Prokaryotic type
Other AARSs
BFO_3356 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Rho_N
Motif
Other DBs
NCBI-ProteinID:
AEW21037
UniProt:
G8UJH2
LinkDB
All DBs
Position
3396445..3398277
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AA seq
610 aa
AA seq
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MACFSEVKNKEIRELSEYFLYFCTIITIFDQVMNVLDLSEQEIVRRGSLEQLRKMNIDPY
PAAAYPVNGYAEEIKANFNDDAQPRQVTIAGRIMSRRIMGKASFMELQDSTGRIQVYITR
EDLCPDENNTEQYNTVFKKLLDIGDFVGIKGFVFRTQMGEISVHAQELTVLSKSLRPLPI
VKEKDGVVYDGFNDPELRYRQRYVDLIVNNDVKNIFFKRNQIYTSMREYFNARGYIEVET
PILQSIPGGAAARPFITHHNALDINLYLRIANELYLKRLIVGGFEGVYEFSKNFRNEGMD
RTHNPEFTCMEIYVAYKDYHWMMEFTEQMLEKICLDVNGTKEITVGDKTIRFKAPFRRVT
MIEAIHEHTGIDITGMNEAQLREMCKQLNIEIDETMGKGKLIDEIFGEKCEGNYIQPTFI
TDYPIEMSPLCKRHRNNPDLTERFELIVNGKELCNAYSELNDPIDQLERFQEQLRLSEKG
DDEAMFIDMDFVRALEYGMPPTSGMGIGIDRLVMLMTGQTTIQEVLFFPQMRPEKTVKKD
APEKYALLGIPAEWVPAIQKAGFVTVEMLDGANPQLLRQLLFELNKKYHLGLELPALQTV
EAWIQSVTGH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtttttcggaagtcaaaaataaggaaatccgtgagctatccgaatattttttg
tatttttgcacgattattaccatttttgaccaagtaatgaacgtattagatttaagcgaa
caggaaatcgtccggcgcggcagtctcgaacagttacgcaagatgaacattgacccgtac
ccggctgccgcatatccggtcaacggatatgccgaagaaataaaggcgaacttcaacgac
gatgcccaaccgcggcaggtaacgattgccggacgtatcatgagccgtcgtatcatgggc
aaagcatcttttatggaattgcaggattcgaccggacgcattcaagtatatatcacccgc
gaggatctctgtccggacgaaaataacacggaacaatacaataccgtgttcaaaaagctg
ctcgacatcggcgattttgtcggtatcaaaggattcgtctttcgtacgcagatgggtgaa
atatccgttcatgcacaagaactgacggtactctcgaagtcgttacgtccgttacctata
gtcaaagaaaaagacggtgtggtctacgacggtttcaatgatccggagttgcgttaccgg
cagcgctatgtcgacctgattgtcaataacgacgtgaaaaatattttcttcaagcgcaac
caaatctacacttcgatgcgtgaatatttcaatgccagaggctacatagaggtggagacg
ccgattctgcaatctattccgggaggagcggcggcgcgtccgtttatcacacatcacaat
gccctcgacatcaatctgtatcttcgcattgccaacgagttatacttgaagcgtctgatt
gtcggtggctttgagggcgtttacgagttttcgaaaaacttccgtaatgaaggcatggac
cgtacgcataatcccgaatttacctgcatggagatttatgtagcatacaaggactatcat
tggatgatggagtttaccgaacagatgcttgaaaagatttgcctcgacgtgaacggcacg
aaggaaataacggttggcgataagaccattcgttttaaagctccgttcagacgcgtgacc
atgattgaggccatccatgaacatacggggatcgacattacgggaatgaatgaagcgcag
ttgcgcgaaatgtgtaaacaactcaacatcgagatcgatgagacgatgggtaaaggtaaa
ctgatcgacgaaatcttcggcgaaaagtgtgaagggaactatatccaacccacgtttatc
accgactatccgatcgagatgtcgcccctctgcaaacgtcaccggaacaatcccgattta
accgaacgtttcgaactgatcgtcaacgggaaggaactttgcaatgcgtattcggaattg
aacgacccgatcgaccagttggagcgttttcaggaacagttacgcctgagcgaaaaagga
gatgatgaggccatgttcatcgatatggactttgtgcgtgcactcgaatacggcatgcct
ccgacgagtggcatgggaattggtatcgaccggctggtgatgttgatgaccgggcagacg
acgattcaggaagtgctgttcttcccccaaatgcgtccggagaagaccgtgaagaaagac
gcgcccgaaaaatatgctctgctaggaataccggccgaatgggtgccggccatacagaaa
gcaggctttgtaacggtcgagatgctggatggtgccaacccgcaattgttgagacaattg
cttttcgagttgaacaagaaataccatctcggtctggaactacctgcgttacaaacggtc
gaagcatggattcaatctgttacggggcattaa
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