Thermanaerosceptrum fracticalcis: BR63_04915
Help
Entry
BR63_04915 CDS
T06762
Name
(GenBank) RNase J family beta-CASP ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tfr
Thermanaerosceptrum fracticalcis
Pathway
tfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BR63_04915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfr03019
]
BR63_04915
Messenger RNA biogenesis [BR:
tfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BR63_04915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
QNB45708
UniProt:
A0A7G6E0V4
LinkDB
All DBs
Position
complement(939258..940925)
Genome browser
AA seq
555 aa
AA seq
DB search
MPENDNKLLLIPLGGLGEIGNNMMVLRYNNEIIVVDAGLMFPEDEMLGIDIVIPDTTYLI
ENKEMIKAIILTHGHEDHIGAMPYVLKEINVPVYGTKLTLGLLQAKLKENNVANAKLIPI
RPRESVKLGAYFTAEFFKVSHSIPDAIGSAFYTPEGIVLHTGDFKLDQTPVDGAVTDFTR
IAELSQKGILVMLSDSTNVERPGFTMSERVVGQTFEETFRQAKERIIVATFASNVHRIQQ
AINAAYKYNKKIAIAGRSMVNVVSIAQETGYLDIPDDTLIELDDISSYPRNRVVVLTTGS
QGEPMSALTRIAMSDHRRVEIVPGDTVIISATPIPGNEKLVARTINQLFRQGAEVIYESV
SGIHVSGHASQEELKLMLNFVKPKFFVPVHGEYRHLVKHSHLAQAVGIPKENIFVVENGQ
VLEFAQQKGTIAGRVTAGRVLIDGLGVGDVGNIVLRDRKQLSQDGILIVVVTINKEENLV
VAGPDIVSRGFVYVRESEELMEEAKEKVKGVLDKCFEKRITDWTTLKSQIRDTLGKYLYE
KMRRRPMIIPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaacgacaataagcttctcttgataccactgggtggtttgggagaaataggt
aataacatgatggtcctgcgttacaacaacgaaatcatcgttgtggacgccggtctcatg
tttccggaagatgaaatgctgggaattgatatcgtcattcccgataccacttatctcata
gaaaataaagaaatgataaaagcaatcatcttaactcacggacatgaagaccatatcgga
gccatgccctatgtcttaaaagagataaatgttcctgtgtacggaacaaaactaacttta
ggcctgttacaggccaaattaaaagaaaacaatgtagcaaatgcaaaacttatccctatt
cgtcccagggaatctgtaaaattaggtgcgtactttaccgccgaattttttaaggtaagc
cacagtatacctgacgccattggctccgctttttacacaccagaaggtatagtactgcac
accggtgattttaaattagaccaaactcccgtcgatggtgctgtcaccgacttcacacgt
atcgccgaattaagccaaaaaggaattctagtcatgctatccgacagtaccaacgtggaa
agacccggctttaccatgtccgaacgtgtcgttgggcaaacttttgaagaaacttttcgc
caggcaaaagaaagaattatcgttgccacttttgcctccaatgtccaccgtatccaacaa
gccattaatgcagcttacaagtacaacaaaaaaattgccatcgccggacgaagcatggta
aacgtggtcagcattgcccaggaaacaggttatctggatattcccgacgataccttaatt
gagctggatgatatttcttcctatccgcgcaatagagttgtggtcctcaccacgggaagc
caaggggagcccatgtcggccctgacacgtatagctatgtctgaccaccgcagggtggaa
atcgtacccggtgacaccgtgatcatctcggccactcccatacctggtaatgaaaaactg
gtggccagaacaattaaccagcttttccgccagggtgcggaagttatttatgaatcagta
agcgggatccatgtttcaggtcacgccagccaggaagaattaaaattaatgctaaacttt
gtaaaacctaaattctttgttcctgttcacggcgagtaccgtcatcttgttaaacattcc
catttggcccaggccgtaggtattcccaaagaaaacatctttgtggttgaaaacggccag
gttctggaatttgcccagcaaaaaggaacaattgccggcagagtgacagcagggagagtt
ttgattgacgggctgggagttggcgacgttggcaacattgtgttacgtgacagaaaacag
ctttcccaggacggtattttgattgtcgttgtcacaatcaataaggaagaaaatctggtt
gtcgccggtcctgatattgtctcccggggttttgtctatgtaagagaatcggaagaatta
atggaagaagccaaagaaaaagttaaaggtgtactggacaagtgttttgaaaaacggata
accgactggaccaccttgaagtcacaaatccgagatactttaggtaaatatctctacgag
aaaatgagacgtcgccctatgatcatccctatcatcatggaagtttag
DBGET
integrated database retrieval system
