Thermanaerosceptrum fracticalcis: BR63_05115
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Entry
BR63_05115 CDS
T06762
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tfr
Thermanaerosceptrum fracticalcis
Pathway
tfr02020
Two-component system
tfr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BR63_05115
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BR63_05115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfr03021
]
BR63_05115
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tfr02035
]
BR63_05115
Transcription machinery [BR:
tfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BR63_05115
Bacterial motility proteins [BR:
tfr02035
]
Flagellar system
Flagellar assembly proteins
Stator
BR63_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
GerE
DUF2316
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QNB45744
UniProt:
A0A7G6E0Z0
LinkDB
All DBs
Position
complement(977667..978437)
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AA seq
256 aa
AA seq
DB search
MKSEPYELWLNYVNDKNPALKEQLILHYVTLVQKIANKVSYYLPSHITKEDLFSYGIFGL
LEAIDRYDPKLGIPFPVFAGKRIKGAIIDGVRKEDWIPVNIRRQARLLEQTYQKLEMKLA
RNATDEEVAAELNITPEELERWLKNTHLFTIISLDEPVTEGQEISLKDNLTDNVSLNPVQ
IAENNEIKMILAKAVEELPEKEKLVISLFYYHDLNNKEIARVLELSDARVSQIHTKAIFR
LRGKLSRMKKTLLGLG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagaaccttatgaactttggttgaattacgtgaatgacaaaaaccctgcactc
aaagaacaacttattttacattatgtaacactggtacagaaaatcgccaacaaggtttct
tattacctgccatcccatattacgaaagaggaccttttcagctatggaatctttggcctt
ctggaagccatagatcgttatgatcctaaactgggtattccctttcccgtctttgccgga
aaaagaataaaaggtgccattattgacggggtaaggaaggaagattggatccccgtaaat
attcgccgccaggcaagacttttggaacagacctatcaaaaattagaaatgaagcttgca
cgtaatgccaccgatgaagaggtagcggcggaattaaacataactccggaagaactggaa
cgctggttgaaaaatacccatttattcaccataatctctttggatgaacctgttacggaa
gggcaggaaatatcattaaaagataatcttacggataatgttagtctaaatcctgtacaa
atagcggagaataacgaaattaaaatgatcctggccaaagcggtggaagaactgcctgaa
aaggaaaaacttgtgatcagtcttttttactatcatgatctaaacaataaagagattgcc
cgtgtcttagagctgtcagatgccagggtatcacaaatacatacgaaagccatttttcgc
ctgcggggtaagctttccagaatgaaaaaaacgttattaggattagggtaa
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