Thermanaerosceptrum fracticalcis: BR63_14790
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Entry
BR63_14790 CDS
T06762
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tfr
Thermanaerosceptrum fracticalcis
Pathway
tfr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tfr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BR63_14790 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfr03021
]
BR63_14790 (rpoB)
03400 DNA repair and recombination proteins [BR:
tfr03400
]
BR63_14790 (rpoB)
Enzymes [BR:
tfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BR63_14790 (rpoB)
Transcription machinery [BR:
tfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BR63_14790 (rpoB)
DNA repair and recombination proteins [BR:
tfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BR63_14790 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
DUF5887
Motif
Other DBs
NCBI-ProteinID:
QNB47436
UniProt:
A0A7G6E5T2
LinkDB
All DBs
Position
2922838..2926182
Genome browser
AA seq
1114 aa
AA seq
DB search
MRHPMEVGKRTRESFARIKEVLEMPNLIEIQQNSYRWFLNEGIREMFRDISPIQDFTGNL
VLEFVDYSLGEPKYSVEECKERDVTFAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTDK
GTFIINGAERVIVSQLVRSPGVYYTEQIDPSGKKVYGATIIPNRGAWLEFETDVNDNIFV
RVDRTRKLPATVLLRALGYSSNGQIAGLFQDDERIRLTLERDHTESEDEALVEIYKRLRP
GEPPTVDSARSLLNTLFFDPKRYDLAHVGRYKLNKKLKVNVPPHIRHVTKEDIVASIHYL
LKLMKGEGKPDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDVDVITPQVL
INIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHH
SHYGRMCPIETPEGPNIGLIGSLSTYARINEFGFIETPYRKVDKETGKVTDEIVYLTADE
EDNYVIAQANAPLDEEGRFINAKVNARHGSEIIVVPVEKVDYMDVSPKQVVSIATAMIPF
LEHDDANRALMGANMQRQAVPLLRTDAPYVGTGEEYKAARDSGVVLLAKEGGVVERVTAN
EIIIRTDEGKLEKHKLIKFSRSNQGTCINQKPIVRRGERVFAGQVIADGPSTDQGELALG
RNVLVAFMTWEGYNYEDAILISKKLVKEDYFTSIHIEEYECDARDTKLGPEEITRDIPNV
GEDVLKDLDERGIIRIGAEVRPGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTS
LRVPHGEAGKVVDVKVFTRENGDELAPGVNQIVRVYIAQKRKISEGDKMAGRHGNKGVIS
RIMPEEDMPFLPDGTPIEIVLNPLGVPSRMNIGQVLETHLGWAAKALGIRVATPVFDGAT
ETDIEEILREAGLPETGKTILYDGRTGEPFDNPITVGYMYMLKLAHLVDDKIHARSTGPY
SLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKG
ENVPEPGVPESFKVLIKELQSLGLDVKVLSENDEEIEIREIDDDISEAAKELGLDIHAPE
RPGPLEDEGEGDDQDDGFIEFDPEDMEEEDFNLD
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatccgatggaagtgggtaaaagaacgcgagaaagttttgcaagaatcaaagaa
gtcctggaaatgcctaatctcattgaaattcagcaaaattcctatcggtggtttcttaat
gagggtattagggagatgtttcgtgacatttcgcctatccaggattttaccggtaattta
gttctggaattcgtagattacagccttggcgaacccaaatattccgttgaggaatgtaaa
gagcgtgacgtaacctttgcggctcctttaagagttaaggtaaggctcattaataaagaa
accggcgaggtaaaagagcaggaagtatttatgggggatttccccttaatgacagataaa
ggcacctttattatcaatggtgcggagagggttattgtcagccagctggtgaggtctccg
ggtgtatactatacggaacagatagaccccagcggcaagaaagtatacggagctacgatt
attcctaaccggggtgcctggctggagtttgaaaccgatgttaacgacaacatctttgtt
cgggtagatagaaccagaaaactgccggccaccgtcctgttgcgagccctgggctatagc
agcaatggacaaattgccggactattccaagatgacgaacggattcgtctgaccctggag
agggaccatacggaatctgaagatgaagctttagtagaaatttataaacgtctaagacct
ggtgaacctcctacggtagacagcgcccgttctttattaaatactttattctttgaccct
aagcgatatgacctggcccatgtagggcgttataagctgaataagaagcttaaggtcaat
gtgcccccccatattcgccatgtcaccaaggaagatattgttgcctctattcactatctt
ctcaagttaatgaagggtgagggcaaacccgacgatattgaccacctgggtaaccggcgc
ctgcgttctgtgggggaactcttacagaaccagttccggattggtttatcccgtatggaa
cgtgtggttcgcgagcgcatgactattcaggatgtggatgtaatcacacctcaggtgctc
attaatattcgcccggtagtggctgctattaaagaattctttggttccagccagctctcc
cagtttatggaccaaaccaaccccctggctgaattaacccataaacgtcgtttgagtgct
ttaggacctggcggtctttcccgggaacgagcaggtttcgaggtccgggacgttcaccac
tcccactacggccggatgtgtcccatagagactcccgaaggtcccaacatcggtttaatt
ggttctttgagtacttatgcccgtattaatgaatttggttttattgaaaccccttatcgt
aaggtagacaaagaaacgggtaaggttaccgatgaaattgtataccttactgccgatgaa
gaggataattatgtgattgctcaggccaacgcacctctggatgaggaaggacgctttatc
aatgccaaggtaaatgcccgtcacggcagcgaaattattgtggtacccgtggaaaaagtt
gactacatggatgtttcgcctaaacaggttgtttctatcgctactgctatgattcccttt
ttggagcatgatgatgctaaccgggccttaatgggcgctaacatgcagcgccaggctgtt
cctttattgcgcacagatgccccctacgtgggaacgggcgaggaatataaagcggcccgg
gattccggcgtggttttactggccaaggaaggcggtgtcgtggaacgggttaccgccaac
gagatcatcatccgtactgatgaggggaaactggaaaaacacaagctgatcaaattttcc
cgttctaaccaggggacttgtatcaaccaaaaacccattgtgagacgtggggagcgagtt
ttcgccggtcaggttattgcagacggtccttccacggatcagggagaattagccttgggt
agaaacgttttggtagcttttatgacctgggaaggttataactatgaagacgctatcctg
atcagcaaaaagctggtcaaggaagattattttacctcgattcatatagaagaatacgaa
tgtgatgcccgggataccaaattaggaccagaggaaattaccagggatatccccaatgtg
ggtgaagatgtgctcaaggatctggatgaacggggtattattcgtatcggagcagaggta
agacccggagatattttggtaggtaaagttacgcccaagggtgaaaccgaactcactgcc
gaggaaaggctcttaagggccatttttggtgagaaagcccgggaagtaagagacacatcc
ttacgtgtaccccatggcgaagccggtaaggttgtggacgtaaaagttttcaccagggaa
aacggcgatgaactggcgccgggagtaaaccagattgttcgcgtttatattgcccagaag
agaaagatctccgaaggtgataaaatggctgggcgtcacgggaataagggggttatctcc
cgcatcatgcctgaggaggatatgcctttcctgcctgacggcacacccattgaaatcgtc
ttgaaccctctgggggtaccctcccggatgaacatcgggcaggttttagagacccacctg
ggctgggcggctaaggctctgggaatcagggtcgccacacctgtctttgatggcgctaca
gaaactgatatcgaagagattttacgtgaagcaggcctgccggaaacgggtaaaaccatc
ctttatgacggcaggaccggtgaaccctttgataaccccatcactgtaggttatatgtat
atgcttaaactggcccacctggtagacgataagattcatgcccgttccacaggtccttac
tctctcgttacccagcagccattgggtggtaaagcccagttcggtgggcagcgctttggg
gagatggaagtatgggctttagaggcatacggtgcagcatatacccttcaggagatccta
acagtaaaatctgacgatgtggtaggccgggttaaaacttatgaagccatcgtcaaggga
gaaaatgttcccgaacccggggtgcctgagtccttcaaagtgttgatcaaagaactgcaa
agtctgggtcttgatgtcaaggtactgtcggagaacgatgaagaaattgaaatccgggaa
attgatgatgatattagcgaagcggctaaggaattggggctcgatatccatgcacctgaa
agaccgggtcctctcgaagatgaaggtgaaggagacgaccaggatgatggctttatcgaa
tttgatccggaagatatggaagaggaagattttaaccttgattaa
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