Thiorhodovibrio frisius: Thiofri_00017
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Entry
Thiofri_00017 CDS
T09561
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00061
Fatty acid biosynthesis
tfri00071
Fatty acid degradation
tfri01100
Metabolic pathways
tfri01212
Fatty acid metabolism
tfri02024
Quorum sensing
tfri04146
Peroxisome
Module
tfri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Thiofri_00017
00071 Fatty acid degradation
Thiofri_00017
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Thiofri_00017
09145 Cellular community - prokaryotes
02024 Quorum sensing
Thiofri_00017
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tfri01004
]
Thiofri_00017
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfri04147
]
Thiofri_00017
Enzymes [BR:
tfri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Thiofri_00017
Lipid biosynthesis proteins [BR:
tfri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Thiofri_00017
Exosome [BR:
tfri04147
]
Exosomal proteins
Exosomal proteins of breast milk
Thiofri_00017
Exosomal proteins of breast cancer cells
Thiofri_00017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
TPR_9
Motif
Other DBs
NCBI-ProteinID:
WPL19971
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All DBs
Position
complement(17502..19322)
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AA seq
606 aa
AA seq
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MEQWSKDLIAVDQAVTLDGLFLHRVRRSPEREAYRWFDRANGAWRSLSWAEIAAQAARWR
QALAGEGLKPGDRVALLLRNCPEWVMFDQAALSLGLVTVPLYTDDRAENAAYILRDCAAR
VLLVQDAYRWKRLAEVMTDGRWPARVVLLDTSKDARALAAKEPAVVVASDWLPSEGAIWH
QRAAGPNELASIVYTSGTTGKPKGVMLTHGNILSNVQGALTLLDVYQEDVFLSFLPLSHM
LERTASYYLPMMAGSTLAYARSVTQLAEDLKNVRPTVIIAVPRVFERVYQRLHEQIRQRP
APTRWLFDLARHFGWVAFEHAQGRRRWHPLLLLWPVLRRLVADKVLERLGGRIRAAVSGG
APLPPEVARLFLGLGLPLIQGYGLTETSPVVSVNPLEDNRPETVGIPLGGVQVRISELDE
LLVSGPGVMRGYWNNQAATAQVLGKDGWFRTGDQARLVGRHIQITGRLKDILVLSNGEKV
PPADMEMAIALDPLFEQAMVLGEGKPFLSALLVLNADLWPSLARDFQLDPQDPASLNDQG
LIKAMLARVRKALADFPGYAKIRRVTLALEPWSIDNGLLTPTMKVKRHQVVEQHRNLIER
MYALDG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatggtcgaaagatctgattgcggttgaccaagctgtcactctcgacgggctt
tttctgcatcgggtgcgccgttccccggagcgcgaggcttatcggtggttcgaccgcgcc
aatggcgcctggcgatctctcagttgggccgagattgccgcgcaggccgcgcgctggcgc
caagcgctggcaggtgaagggctaaaaccgggtgatcgggtcgccctgttactgcgcaat
tgtccggaatgggtgatgttcgatcaagcggcgctgtcactcggactggtgacagtgccc
ctgtataccgacgaccgcgccgagaatgccgcctatattctccgcgactgcgctgccagg
gtattgctggtgcaggacgcataccgctggaagcgcctggccgaggtcatgaccgacgga
cgctggccagcgcgtgtggtactgctcgatacatccaaagacgcccgtgcattggccgcc
aaagagcctgctgtggtggtggccagtgactggctgccgagcgagggcgcgatttggcac
cagcgcgcggccgggcccaatgagttggccagtatcgtctacacctctggcaccaccggc
aagcccaaaggcgtgatgctgacgcatgggaacattctgagtaatgtacaaggggcgctg
accctgctggatgtctatcaggaagatgtgtttctgtccttcctgccgctgtcgcacatg
ctcgagcgcacggccagctattatctgccgatgatggccggctccaccctggcctacgcg
cgctcggtgacgcagctggcagaagatcttaaaaacgtccgcccgacggtgattattgcc
gtgccaagggtgtttgagcgtgtctaccagcgtctgcatgaacaaattcgccagcgtccg
gccccgacacgctggctgtttgacctggccaggcactttggctgggtggcctttgagcat
gctcaggggcggcggcgctggcatccgctgctattgctgtggccggtgctcaggcgcttg
gttgcggataaggtgcttgaacgcctcggcgggcgcattcgcgcggctgttagcggtggt
gcgcccctcccgcctgaggtggcgcgactgtttcttggcctggggctgccgttaattcag
ggctatggtctgaccgaaaccagcccggtggtaagtgtcaatccacttgaggacaaccgc
ccagagacggtcggcatcccgctaggcggcgtgcaggtgcgcattagtgaacttgacgaa
ctcctggtcagcggccccggggtgatgcgcgggtactggaacaaccaggccgccaccgcg
caggttctgggcaaggacggctggtttcgcactggagatcaggcacggctggtagggcgc
catattcagatcaccgggcggctgaaggacattctggtgctctccaatggcgagaaggta
ccgccggctgatatggagatggccattgcgctcgatccgctgtttgagcaagccatggta
cttggcgagggcaagccctttttgagcgccctgctggtgctcaatgccgacctctggccg
agccttgctcgcgatttccagctcgacccacaggacccggcgagcttgaatgatcagggc
ctgatcaaggccatgctagcgcgggtgcgtaaggcgctggcagactttcccggctatgcc
aaaattcgccgcgtcaccctagcgcttgagccttggtcaatcgacaacggcttgctgacc
cccaccatgaaggtcaagcgccatcaggttgtcgagcagcatcgcaacttgatcgaacgt
atgtacgcgctggacggctga
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