Thiorhodovibrio frisius: Thiofri_00141
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Entry
Thiofri_00141 CDS
T09561
Symbol
kdsA_1
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00541
Biosynthesis of various nucleotide sugars
tfri01100
Metabolic pathways
tfri01250
Biosynthesis of nucleotide sugars
Module
tfri_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Thiofri_00141 (kdsA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tfri01005
]
Thiofri_00141 (kdsA_1)
Enzymes [BR:
tfri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Thiofri_00141 (kdsA_1)
Lipopolysaccharide biosynthesis proteins [BR:
tfri01005
]
Lipid A
Thiofri_00141 (kdsA_1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MR_MLE_C
Motif
Other DBs
NCBI-ProteinID:
WPL20085
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Position
139082..139894
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AA seq
270 aa
AA seq
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MNPPGFLLLGGMNVLESRDLALRTCEHFVTVTAKLGMSYVFKASFDKANRSSIHSYRGPG
LEEGLRLFEAVKQAFGVRLLTDVHEPWQAAPVAEVVDMLQLPAFLARQTDLVIALAKTGK
PINIKKPQFLSPGQMVHIVEKFREAGNDQLLLCDRGTCFGYDNLVVDMLGFRVMKDACGG
LPVIFDVTHALQQRDPLGAASGGRRKQALELARAGMAVGLDGLFLEAHPDPDHAQCDGPS
ALPLHLLEPFLAQIKAIDDVVKAMPALDID
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaccaggcttcctcctgctcggcggcatgaatgtgctggaatcgcgcgatctg
gcgctgcgcacctgcgagcactttgtcaccgtcaccgccaagctgggcatgtcctatgtc
ttcaaggcgagtttcgacaaggccaatcgctcgtcgatccattcctatcgcgggccgggg
ctggaggaggggctgcgcctgttcgaggccgtgaaacaggccttcggcgtgcggctgctc
accgacgtgcatgagccctggcaggccgcacccgtggccgaggtggtggacatgttgcaa
ttgccggcctttctcgcgcgccagaccgatctggtcatcgccctggccaagaccggcaaa
ccgatcaacatcaagaagccgcagtttttgagccccgggcagatggtgcacatcgtcgag
aagttccgcgaggcgggtaacgaccagctcctgctgtgtgatcgcggcacctgtttcggc
tacgacaacctggtggtggacatgctcggctttcgggtgatgaaggacgcctgcggcggc
ctgccggtgatcttcgacgtgacccatgccttgcaacagcgcgacccgctgggcgcggcc
tcgggtggacggcgcaagcaggcgctggagttggcgcgtgccggtatggctgttggcctc
gacgggctgtttctggaggcgcaccccgatccggatcatgcgcagtgcgatggccccagt
gccttgccgctgcatctgcttgaacccttcctcgcacagatcaaggccattgacgatgtg
gtgaaagccatgccggcgctggacatcgactag
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