Thiorhodovibrio frisius: Thiofri_00372
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Entry
Thiofri_00372 CDS
T09561
Symbol
groL
Name
(GenBank) Stress protein H5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thiofri_00372 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfri03019
]
Thiofri_00372 (groL)
03110 Chaperones and folding catalysts [BR:
tfri03110
]
Thiofri_00372 (groL)
03029 Mitochondrial biogenesis [BR:
tfri03029
]
Thiofri_00372 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfri04147
]
Thiofri_00372 (groL)
Enzymes [BR:
tfri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Thiofri_00372 (groL)
Messenger RNA biogenesis [BR:
tfri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Thiofri_00372 (groL)
Chaperones and folding catalysts [BR:
tfri03110
]
Heat shock proteins
HSP60 / Chaperonin
Thiofri_00372 (groL)
Mitochondrial biogenesis [BR:
tfri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Thiofri_00372 (groL)
Exosome [BR:
tfri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Thiofri_00372 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Thiofri_00372 (groL)
Exosomal proteins of breast cancer cells
Thiofri_00372 (groL)
Exosomal proteins of colorectal cancer cells
Thiofri_00372 (groL)
Exosomal proteins of bladder cancer cells
Thiofri_00372 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
BNYVV_TGB3
Motif
Other DBs
NCBI-ProteinID:
WPL20292
LinkDB
All DBs
Position
complement(307226..308881)
Genome browser
AA seq
551 aa
AA seq
DB search
MSAKEVKFGSDARARMMDGVNVLANAVKVTLGPKGRNVVLEKSFGSPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASQTSDVAGDGTTTATVLAQAMVREGLKAVAAGMNPMDLKRGM
DKAVESAVEQLRALSRPCSDNKEIAQVGTISANSDDSIGEIIAEAMEKVGKEGVITVEEG
KSLHNELDVVEGMQFDRGYLSPYFINNQQSQTAELEDPYILLHDKKISNIRDLLPVLEGV
AKSGKPLMIVAEDIEGEALATLVVNSIRGIIKVCAVKAPGFGDRRKAMLQDIAILTGATV
ISEEVGLSLEKATLNELGQAKKIQVSKEETTIIDGSGSDVDIKGRCEQIRAQVEETTSDY
DREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALV
RALNGVRGLKGNNHDQDVGVGIALRAMEEPLRQIVHNAGAEASVVLQKVAEGEGNYGYNA
ASGEYGDLVSMGILDPTKVSRTALQNACSIAGLMITTEAMVAEEPKDDAPAGGGMGGGMG
GMGDMGGMGMM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaagaagttaagtttggatctgatgcgcgcgcgcgcatgatggatggcgtc
aatgtcctggccaacgccgtcaaagttaccctgggcccgaaaggccgcaacgtcgtgctg
gagaagtccttcggctcacccaccgtcactaaagatggtgtctctgtggccaaggaaatc
gaactgaaagacaagttcgagaacatgggcgcccagatggtcaaggaagtcgcttcccag
acctccgacgtcgccggtgacggcaccacgaccgctaccgtgctggctcaggccatggtg
cgcgaaggcctgaaggccgtcgccgctggcatgaacccgatggacctgaagcgcggcatg
gacaaagccgtcgagagcgccgtcgagcagttgcgcgccctgtcgcgtccttgctccgat
aacaaggaaatcgcccaggtcggcaccatctcagccaactccgatgacagcattggcgag
attatcgccgaggcgatggagaaggtcggcaaggaaggcgtcatcaccgttgaagaaggc
aagtcgctgcacaatgagctggatgtcgtcgaaggcatgcagttcgaccgtggctatctg
tcgccctacttcatcaacaaccagcagagccagaccgctgaactggaagacccctacatc
ctgctgcacgacaagaagatttccaacatccgcgacctgctgccggtgctcgagggcgtg
gccaaatccggcaagccgctgatgatcgtcgccgaggatatcgaaggcgaggctctggcc
actctggtggtcaactccatccgtggcatcattaaggtctgcgcagtcaaggctcctggc
ttcggtgaccgtcgcaaggccatgttgcaggatatcgccatcctgaccggcgccaccgtg
atctccgaggaagttggtctgtcgcttgagaaagccaccctgaatgaactcggccaagcc
aagaagatccaggtcagcaaggaagaaaccaccatcatcgacggctccggttccgatgtc
gacatcaagggccgctgcgagcagattcgcgcccaggtcgaggagactacctccgactac
gaccgcgagaagctccaggagcgtctggccaagctggccggcggcgtggccgtcatcaag
gtgggcgccgcgaccgaagtcgagatgaaggaaaagaaagcccgtgtcgaggatgccctg
cacgccacccgcgcggcagtcgaggaaggcattgtgcccggcggtggtgtggcactggtg
cgcgcgctcaacggcgtgcgtggcctcaagggcaataaccacgaccaggatgtcggtgtt
ggtatcgccctgcgcgcgatggaagagccgctgcgccagattgtgcataacgccggcgcc
gaggcctcagttgtgctgcagaaagttgccgaaggcgaaggcaattacggctacaacgcc
gctagcggcgagtatggcgatttggtcagcatgggtattctcgacccgaccaaagtgtcc
cgcaccgcgctgcagaacgcctgctccatcgccggtctgatgattaccaccgaggccatg
gtggccgaggagcccaaggacgatgcacctgccggtggcggcatgggcggcggcatgggt
ggtatgggcgacatgggcggcatgggcatgatgtaa
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