Thiorhodovibrio frisius: Thiofri_00531
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Entry
Thiofri_00531 CDS
T09561
Symbol
gmd_5
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00051
Fructose and mannose metabolism
tfri00541
Biosynthesis of various nucleotide sugars
tfri01100
Metabolic pathways
tfri01250
Biosynthesis of nucleotide sugars
Module
tfri_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
Thiofri_00531 (gmd_5)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Thiofri_00531 (gmd_5)
Enzymes [BR:
tfri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
Thiofri_00531 (gmd_5)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Motif
Other DBs
NCBI-ProteinID:
WPL20433
LinkDB
All DBs
Position
complement(457700..458749)
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AA seq
349 aa
AA seq
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MNESVEVGRNAPVDSNPPVALITGITGQDGSYLTELLLEQGYAVHGAVRRTSSLERSRLA
HLYANKDLYNQRLFLHYADLDDPTTLRRVLTRVAPREIYHLAGQSHVGLSFEIPETTCEF
TAMGTLRLLEILRDLPRQPRFFHAASSEIFGRPEESPQSEKTPMAPVSPYACAKAFATQM
VRIYRDAHGLFAVNGILYNHESPRRGENFVTKKICRTAAAIKAGQESVLKLGDTNARRDW
GHARDYVRGMWLALQHDQPDDYVFATGVLHSVQDILEHAFSALGLKWQEHVVIDPQFLRP
SEPMFLVGDNRKAREALGWQPTVAFGELIEEMTLAELARLEARPEQSLA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtctgtcgaggtggggcgcaatgccccggtcgattccaacccgccggttgcc
ttgattactggcatcactgggcaggatggctcctacctgacggaactgctgctcgagcag
ggttatgcggtgcatggcgcggtgcgccgcaccagcagcttggagcgcagtcggcttgcg
catctctacgcgaacaaagacctctacaaccagcggctatttttgcattacgccgatctt
gacgaccccacaaccttgcgccgcgtgctgactcgggtggccccacgggaaatctatcat
ctcgccgggcaaagtcatgtcgggctgagctttgagatacccgagaccacatgtgagttc
acggccatgggaaccttgcgcctgcttgagattttgcgcgatttgccgcgacaaccccgg
ttctttcacgcggcctcgagcgagatttttggccgtccggaggaaagcccacagagcgag
aagactccgatggcgccagttagtccgtacgcctgtgccaaggctttcgccacgcagatg
gtgcgcatctaccgggacgcccacgggctgtttgccgtgaacggcattttgtacaaccac
gagtcgccgcggcgcggcgagaattttgtgaccaagaagatttgccgcaccgccgcggct
attaaggctggccaggaatcagtcctcaagctcggcgacaccaacgcccgacgggactgg
ggccatgcacgcgattacgtgcgcggcatgtggcttgccttgcagcacgaccagccggac
gattacgtttttgcaaccggcgtgctgcatagcgtgcaggacattctggagcacgccttt
tccgcgctgggtttgaagtggcaagagcatgtggtcatagacccgcagtttctccgccca
agcgagccgatgtttctggttggagacaaccgcaaggccagggaggcgcttggctggcaa
ccgactgttgcctttggggaattgattgaggaaatgacccttgccgagcttgcccgcttg
gaagcaaggcccgagcaatcgctggcgtga
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