Thiorhodovibrio frisius: Thiofri_00646
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Entry
Thiofri_00646 CDS
T09561
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri03420
Nucleotide excision repair
tfri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thiofri_00646 (uvrD2)
03430 Mismatch repair
Thiofri_00646 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfri03400
]
Thiofri_00646 (uvrD2)
Enzymes [BR:
tfri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thiofri_00646 (uvrD2)
DNA repair and recombination proteins [BR:
tfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thiofri_00646 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
Thiofri_00646 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
Viral_helicase1
SLFN-g3_helicase
UvrD_C_2
DUF4358
NACHT
DEAD
AAA_22
cobW
ResIII
AAA_12
AAA_16
ABC_tran
AAA_14
NPHP3_N
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WPL20547
LinkDB
All DBs
Position
571427..573199
Genome browser
AA seq
590 aa
AA seq
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MKSFSKIQNQVTIIQAVAGSGKTTLLKNVLKEARTTAGLTKEQILFVTYSRALAKELREE
LGDLARVTTLHALGLSLIRQNLEYFSFKKIPKRAKNNKDRDLFLLVNSSVTPEAVLKKFY
RKREYKGQFTGTVCRELSIPNNLGKTLINRVNQRKREENVCSYADMIRLGSTVCQAFLKK
KEISFDAPRLLLVDEYQDFNAIEKRFVLRLINISETSLVVGDDRQAIYSFKGASCGAVRK
LAKKLPESSYTSLDHTYRLTKPTAALVNACPDRKKYPIIKSSKEGGIPFYHKSPSRELAL
DAVAKKIKNLIDQGGRPNEIAVITRFKKDFRQFTYFLSKHDIKIGVSDLPKDEENILQHF
LAFSEAVLDLNNKKLKDYLEYYYGLNEKQAQEVALSCGVVINRQLLNIDDKTATKCRRVL
NGVSDLRRSLSFDKLKRTFKERCQGKVDAYHHLGITSILNRYGLLINFGNSVKDVLVKLK
MFLDNPERDGIYVGTQHKAKGKAWDHVFLIDVFDENRNPLTKNWDRNSELNLFHVAITRP
KQRLYLFFFEEYQAVDSTINTKKKRIKNVLTSFLPKESFLLENCEVEVIG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcttttctaaaatccaaaaccaagtaacaattattcaggcagtagcaggtagt
ggaaaaactactcttttgaagaatgttcttaaagaggcaagaacaactgccgggctaact
aaggagcaaattcttttcgttacctactctagggctttagcgaaagaacttcgggaagaa
cttggcgatctagcaagagttacgacgcttcatgctttaggtcttagcttgataagacag
aacctagagtatttctcgtttaaaaaaataccaaagcgagcaaagaacaacaaagaccgt
gatttatttcttttagttaattcttctgttaccccagaagcagttttaaaaaagttttat
cgaaagcgagaatacaaaggtcaatttaccggaacagtttgccgcgagttatctattccg
aacaaccttggaaaaacactgatcaatcgcgttaatcagagaaagcgagaagaaaatgtt
tgctcctacgcagatatgatccgtctggggtctacagtatgccaagcatttttgaagaaa
aaggaaatttcttttgatgctccaagactattgttggtcgatgagtaccaagactttaac
gcgatagaaaagcgttttgtcttaaggttgattaatatctctgagacatccttagtcgta
ggggatgatcggcaagctatctattcttttaaaggggcatcatgcggagctgtaaggaaa
ctcgctaagaaacttcctgaaagtagctacacttctttagaccacacttatcggcttaca
aagccaactgctgcactggttaacgcatgcccagatcgaaagaaatatccaattattaaa
agttcaaaagaaggcggaatcccgttttatcataagtcgccgagcagagagttagcttta
gatgctgttgctaagaaaattaaaaatcttattgatcaggggggtcgacctaatgaaatt
gcggttatcacaagattcaaaaaggactttaggcagtttacttattttctttctaaacat
gatatcaagattggggtgtcagatctccctaaagacgaagaaaatatccttcaacatttt
ctagccttttctgaagcagtgttagatttaaataataaaaaactgaaagactatcttgaa
tattattatggcctgaatgaaaaacaagcccaagaagttgctttaagttgtggagtggtt
ataaacaggcagttattaaacattgatgataaaacagcaacaaaatgccggagagtttta
aacggggtatctgatttaagaagaagtctttcttttgataagttaaaaagaacctttaaa
gagagatgccagggcaaggtcgatgcttaccatcatcttggaattacaagtatcctgaat
cgttatggtttgcttataaattttggaaatagtgttaaggatgttttggtaaaactaaaa
atgttcttggataaccctgagagggatggtatttatgttggaacccaacataaagctaaa
ggaaaagcttgggatcatgttttcttaatagatgttttcgatgagaatagaaatccactc
actaaaaattgggataggaattcggaattaaaccttttccatgtggcaattacaagaccg
aaacaaagattatatttatttttctttgaggaatatcaggccgttgattccacaataaat
acaaaaaagaagagaattaaaaatgtacttacttcatttctccctaaagaaagttttctc
ttagagaattgtgaggtagaggttattggttga
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