Thiorhodovibrio frisius: Thiofri_00821
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Entry
Thiofri_00821 CDS
T09561
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00362
Benzoate degradation
tfri00620
Pyruvate metabolism
tfri00650
Butanoate metabolism
tfri01100
Metabolic pathways
tfri01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Thiofri_00821 (gcdB)
00650 Butanoate metabolism
Thiofri_00821 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Thiofri_00821 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfri02000
]
Thiofri_00821 (gcdB)
Enzymes [BR:
tfri01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Thiofri_00821 (gcdB)
Transporters [BR:
tfri02000
]
Other transporters
Primary active transporters [TC:
3
]
Thiofri_00821 (gcdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
LSDAT_prok
Motif
Other DBs
NCBI-ProteinID:
WPL20716
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All DBs
Position
762374..763507
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AA seq
377 aa
AA seq
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MEELLKLWASMGIANLAPGQVLMMAVGGVLIYLAIAKKFEPLLLVPIGFGALLSNIPVAD
IGGHDGMIGQIYAVGVETGVFPLLIFMGVGALTDFGALIARPSTLLLGAAAQFGIFATLL
GAVALNFVPGFDFSLQDASAIAIIGGADGPTAIFLASRLAPDLLGAIAVAAYSYMALVPI
IQPPIMRVLTTKEERAVVMQQLRPVSRLERMLFPFVVLLLCAMLLPSAAPLIGMLTFGNL
LRECGVVERLSRAAQNEIINIVTIMLGLAIGSKLSAEKFLTLETLGILALGALAFAIGTA
AGVLMGKIMHRVTGGKVNPLIGAAGVSAVPMAARVVNRVGLEENHQNFLLMHAMGPNVAG
VIGSAVAAGVLLALTGG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaattgctcaaactctgggcgtccatggggatcgccaacctggccccgggtcag
gtgctgatgatggcggtcggcggtgtgctcatctacctcgctattgcgaagaagttcgag
ccgctgctgctggtgccaatcggctttggggcgctgctgagcaacattcctgtcgccgat
attggtgggcatgatgggatgatcggccagatctatgccgttggggtcgagaccggcgtc
ttcccgctgctgatttttatgggggttggggcgctgaccgacttcggtgcgctgatcgcc
cggccctcgacactgctgcttggcgcggctgcgcagttcggcatttttgccacgctgctt
ggcgcggtggcgctgaatttcgtccccgggtttgatttttcccttcaggatgcctcggcc
attgccatcatcggcggcgccgacgggccaacggcgatttttctggcgtctcggctcgcg
cctgatctgctcggcgctattgccgtggctgcttattcctatatggccttggtgcctatt
atccagccacctatcatgcgcgtcctgaccaccaaagaggagcgcgcggtggtgatgcag
caactgcggccggtgtcgcggctggagcgcatgctgtttccttttgtggtgcttctgctg
tgcgccatgctgctgccctcggccgcgccactgatcggcatgctcacctttggcaatctg
ctgcgcgaatgcggcgtggttgagcgcctgagccgcgcggcccagaacgaaatcatcaac
atcgtcaccatcatgctcggcttggcaattggctccaagctgtcggcggaaaaattcctg
accctcgagaccctggggattcttgcgctgggcgctctggctttcgccataggcactgcc
gcaggagtgctgatgggcaagatcatgcaccgtgttaccggcggtaaggtgaatccgctg
atcggtgctgctggtgtttcagccgtgcccatggcggcgcgcgtcgtcaatcgcgtcggg
ctcgaggaaaatcatcaaaacttccttctgatgcatgccatggggccgaatgtggcggga
gtcatcggctcggccgtcgcagccggagtgctgttggccctgacgggggggtaa
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