Thiorhodovibrio frisius: Thiofri_00900
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Entry
Thiofri_00900 CDS
T09561
Symbol
smc
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfri03036
]
Thiofri_00900 (smc)
Chromosome and associated proteins [BR:
tfri03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Thiofri_00900 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
Nsp1_C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WPL20797
LinkDB
All DBs
Position
complement(850966..854469)
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AA seq
1167 aa
AA seq
DB search
MRLEKIKIAGFKSFVDPTTVPFPSNLVGIVGPNGCGKSNVIDAVRWVMGESSAKMLRGES
MADVIFNGSTGRKPVGMATIELLFDNHDGGAGGAFAAFGQISVKRQVSRDGQSSYFLNGS
RCRRRDIQDLFLGTGLGPRSYSIIEQGMISRFIEARPEELRLFIEEAAGISKYKERRRET
ETRMRHTRENLERLEDVRDEVSKQLQHLERQAATAEKYRQLKAQEETLQAQLAALHWRDL
DTDINTRERALAAAENALEANRAEQRACEAEIERLRAAHADASEQFNQVQGQYYAVGSEI
ARLEQAISFARERRGRQQTELSRVEQELSDAQQLDTRDRDRLAELDTELERDQPALETAR
EHLEGVAEQLEQAQEALDGIQRQWDDWQTRVSEPAQQAQIERGRINQIEQRLNQDQQRAE
RLQQELARLDTAELQSRLEHLAERTEGLDERISLAADTQTRASEQLRNADEERRSLAGRL
DAARTELQTARGRQSSLEALQESALASDDDSRANWLDQQGLLDAPRLIDLLEVASGWENA
VEAALGQALGAIGSEAFARHAEQADGTGLMLFDRRARASGAVADADRLLAHITSDWPLEG
LLGRYLCAENLTDALARREQLAPGECLVTRDGTLVAHDWLHSTAPDGPSLAGSLLRAEEL
KSLQAQTEELDDVIAELAEQQITLANERQQLEREREAAINSVTQLSRERAAMDAEIGAGR
ARLEHLRERGEALQAELAELADARETGLEELEEARERLTLALEASEQVAAERDQCGRERE
RLRTALTSARAEEQQARNRVAELTLNIETRRASREATQANLERAEQQLTQLSQRRDELGK
ELEAAAEPETEAREQLETQLERRMEVEEALSAARTQMEQLSTEVNEQEQERHRLEQANAN
AQADLAERRVQLQERLVRRRTFEEQLATDGKEPRALLEGLESGATADLWQQRLSEIGAKI
SRLGNINLAAIDEFQEQSERMRYLDEQRQDIQSSLDTLESAIRKIDRETRTRFKETYDRV
NSGLQALFPRLFGGGNAYLELTDDDLLETGVTIMARPPGKRNASIHLLSGGEKALTAVAL
VFSIFELNPAPFCLLDEVDAPLDDANVSRFCQLVREMSARTQFIFISHNKVTMEIAEQLI
GVTMHEPGVSRLVSVDIEDAARLAGAS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgaaaaaatcaaaatcgccggttttaagtccttcgtcgacccaacgacggtg
ccttttccgagcaatttggtcggcattgtggggccgaatggctgcggtaagtcgaatgtg
atcgacgccgtacgctgggtgatgggtgagagttcggcgaagatgctgcgtggggagtcc
atggcggatgtcatcttcaatggctcgaccggacgcaagcctgtggggatggcgaccatt
gagttgttgttcgacaaccacgatggtggcgctggtggggcctttgccgctttcgggcag
atttctgtcaagcgccaagtgtcgcgcgatgggcagtcgagttattttctcaacggttcg
cgctgccgccgacgcgatattcaggatcttttccttggcaccggcctggggccgcgcagc
tactccatcatcgagcagggcatgatctcgcgctttatcgaggcgcgcccggaagagctg
cggctgttcattgaggaagcggccggtatttccaaatacaaggagcgtcggcgcgagacc
gagacccgcatgcgccacacgcgcgagaatcttgagcgactcgaggacgtgcgcgatgag
gtgtccaagcagttgcagcatctcgaacgccaggcagcgacggcggagaagtatcgccag
ctgaaggcgcaggaggagacactccaggcccagctcgccgccctgcactggcgcgatctc
gacaccgacatcaacacccgcgagcgcgccctggccgccgccgagaacgcgcttgaggcc
aatcgcgccgagcaacgcgcttgcgaggcggagatcgagcgcctgcgcgccgcccatgcc
gacgcttccgaacagttcaatcaggtgcagggccaatactatgccgtgggctcggagatc
gctcggctggaacaggccatcagcttcgcgcgcgagcgccgcggccgtcagcagaccgag
cttagccgcgtcgagcaggaattatccgatgcccagcaactcgacacgcgcgaccgcgac
cgcctggccgagttggataccgaacttgaacgcgaccagcccgcgctggaaaccgcacgc
gagcatctcgaaggcgtcgctgagcaactcgagcaagcgcaagaggcgctcgatggcatc
cagcggcaatgggatgattggcaaacgcgcgttagcgagccggcgcagcaggcgcaaatc
gagcgcgggcgcatcaatcaaattgagcaacgcctgaaccaggatcaacagcgcgccgag
cgtttgcagcaagagttggcgcgcctggacacggcggaactgcaatcccgactcgagcac
ctggccgaacgcaccgagggcctggatgagcgcatcagcttggccgccgatacccaaacc
cgcgccagcgagcaattgcgcaatgccgacgaggagcgccgctccctggccggtcgcctg
gatgccgcgcgcaccgagctgcaaaccgcacgcggtcgccagtcgtcgcttgaggcactg
caagaaagcgccctggccagcgacgatgacagccgtgctaactggctggatcaacagggc
ctgctcgacgccccgcgcctgatcgacctgctagaggtcgccagcggctgggagaacgcg
gtcgaggccgcgctcggccaagctcttggcgccatcggcagtgaggccttcgcgcgccat
gccgagcaggccgacggcaccgggctgatgctgtttgaccgcagggcgcgcgcgtctggc
gcggtcgctgatgccgaccgtctgctcgcgcacatcacaagcgactggccgctcgaagga
ctgctcggccgatatctatgcgctgagaatctaaccgacgccctagcccggcgcgagcaa
ctcgccccgggcgaatgcctggtcacccgcgacggcaccctggtcgcacacgactggctg
cacagcactgcgcccgatggccccagcctggccggcagcctgttacgcgccgaggagctg
aagagccttcaggcccaaaccgaagagcttgacgatgtcatcgccgaactggccgagcag
caaatcaccctggccaatgagcgccagcagcttgagcgggagcgcgaagcagccatcaat
agcgtcacccaactcagccgcgagcgcgcggccatggacgccgaaatcggcgccgggcgc
gcgcgcctggagcacctgcgcgaacgtggcgaagccctccaagcggagctggctgaactg
gccgacgcgcgcgaaactggtctggaagagttagaagaggcgcgcgaacgcctgaccctc
gcactcgaagccagcgagcaggtcgccgccgagcgcgatcagtgcggacgcgagcgcgag
cgcctgcgcaccgcgctcaccagcgcccgcgccgaggaacagcaggcacgcaaccgggtc
gccgagctcacgctcaacatcgaaacccgccgcgcctcgcgcgaggccacccaggccaac
ttagaacgcgccgagcagcaactcacgcaactcagccaaaggcgcgatgaactcggcaag
gaactcgaagccgccgccgagcccgaaaccgaagcgagagagcagctcgaaacccagctc
gaacgccgcatggaggtagaagaggcacttagcgccgcgcgcacccagatggaacagctc
agcaccgaagtcaacgagcaagagcaagaacgccatcgccttgagcaagccaacgccaat
gcccaggccgacctcgccgaacgccgggtgcagttacaggagcgcttggtgcgccgccgc
accttcgaggaacagctcgccaccgacggcaaggagccgcgcgccctgctcgaagggctg
gaaagcggtgccacagccgatctctggcagcagcgcctgagcgagatcggcgccaaaatc
tcgcgtctgggcaacatcaacctggccgccattgatgagtttcaggagcaatccgagcgc
atgcgctacctcgacgagcagcgtcaggacattcagtcctcgctcgacaccctcgagagc
gccatccgcaaaatcgaccgcgaaacccgcacccgtttcaaggagacctacgaccgcgtc
aactcagggctgcaagcactctttccgcgcctattcggcggcggtaatgcctatctggaa
ctgaccgacgacgacctgctcgaaaccggcgttaccatcatggcgcggccaccaggcaag
cgtaacgccagcatccatctgctctccggcggcgaaaaagcgctcaccgctgtggccctg
gtcttttccatcttcgagctcaaccccgcccccttctgtctgctcgacgaggtcgacgcg
ccgcttgatgacgccaatgtcagccgcttctgccagctggtgcgcgagatgtcggcacgc
acccagtttatttttatcagccacaacaaggtcactatggagattgccgagcagctcatc
ggcgtgaccatgcatgagcccggcgtctcgcgtctggtgtcggtcgacattgaggatgct
gcgcgtttggcaggggcgtcctga
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